RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 AHCYP23526 432 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 MMP11P24347 488 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 HLA-FP30511 346 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 DGCR2P98153 550 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 SHEQ5VZ18 495 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 C12orf73Q69YU5 71 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 OR7G3Q8NG95 312 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 REEP4Q9H6H4 257 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 CXXC1Q9P0U4 656 aaPredicted RBP16.06■□□□□ 0.16
PTPRA-205ENST00000399903 COPS3Q9UNS2 423 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 KCNMB2Q9Y691 235 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 FAM183AA6NL82 134 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF8P17098 575 aaPredicted RBP16.05■□□□□ 0.16
PTPRA-205ENST00000399903 TIA1P31483 386 aaKnown RBP eCLIP16.05■□□□□ 0.16
PTPRA-205ENST00000399903 LIMS1P48059 325 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 PRKAG1P54619 331 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 TPBGQ13641 420 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 ARHGAP15Q53QZ3 475 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 ASTLQ6HA08 431 aaPredicted RBP16.05■□□□□ 0.16
PTPRA-205ENST00000399903 METAP1DQ6UB28 335 aaPredicted RBP16.05■□□□□ 0.16
PTPRA-205ENST00000399903 Q6ZVU0 165 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 RRM2BQ7LG56 351 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 CHST14Q8NCH0 376 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 OR4D11Q8NGI4 311 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 TEX47Q8TBZ9 253 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 OVCA2Q8WZ82 227 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 KAT2AQ92830 837 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 SCMH1Q96GD3 660 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 KCNK12Q9HB15 430 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 LSM7Q9UK45 103 aaKnown RBP16.05■□□□□ 0.16
PTPRA-205ENST00000399903 FKBP7Q9Y680 259 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 SLC22A23A1A5C7 686 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 LEFTY2O00292 366 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 PDCD5O14737 125 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 SLC19A2O60779 497 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 CBX7O95931 251 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 HK1P19367 917 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 BUD31P41223 144 aaPredicted RBP16.05■□□□□ 0.16
PTPRA-205ENST00000399903 PREPP48147 710 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 HMGA2P52926 109 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 PTSQ03393 145 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 SLC3A1Q07837 685 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 COL9A2Q14055 689 aaPredicted RBP16.05■□□□□ 0.16
PTPRA-205ENST00000399903 DUSP6Q16828 381 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 C3orf38Q5JPI3 329 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 CDKL4Q5MAI5 379 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 CD276Q5ZPR3 534 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 RETSATQ6NUM9 610 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 SLC30A6Q6NXT4 461 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 TCEAL8Q8IYN2 117 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 OR51G2Q8NGK0 314 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 RPLP0P6Q8NHW5 317 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 TEFMQ96QE5 360 aaKnown RBP16.05■□□□□ 0.16
PTPRA-205ENST00000399903 GPA33Q99795 319 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 YIPF4Q9BSR8 244 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 MED18Q9BUE0 208 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 SLC12A9Q9BXP2 914 aa16.05■□□□□ 0.16
PTPRA-205ENST00000399903 TP53BP1Q12888 1972 aaPredicted RBP16.05■□□□□ 0.16
PTPRA-205ENST00000399903 TFP02787 698 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 SLC1A3P43003 542 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 CCNJQ5T5M9 372 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 SLC25A25Q6KCM7 469 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 NLRC3Q7RTR2 1065 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 ZER1Q7Z7L7 766 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 NR2C2APQ86WQ0 139 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 HORMAD2Q8N7B1 307 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 OR10Z1Q8NGY1 313 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 CYB5D2Q8WUJ1 264 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 SLC38A5Q8WUX1 472 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 GSDMCQ9BYG8 508 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 TRDV1A0A1B0GX56 115 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 ARHGEF33A8MVX0 844 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 ANHXE9PGG2 379 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 FAAHO00519 579 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 FRS3O43559 492 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF821O75541 412 aaPredicted RBP16.04■□□□□ 0.16
PTPRA-205ENST00000399903 LPLP06858 475 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 ZP3P21754 424 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 SLC6A11P48066 632 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 HNMTP50135 292 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 MACC1Q6ZN28 852 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 COMMD6Q7Z4G1 85 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 GPR32P1Q8NGA4 272 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 BBS10Q8TAM1 723 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF689Q96CS4 500 aaPredicted RBP16.04■□□□□ 0.16
PTPRA-205ENST00000399903 TRMT2BQ96GJ1 504 aaKnown RBP16.04■□□□□ 0.16
PTPRA-205ENST00000399903 OR2M2Q96R28 347 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 CFHR5Q9BXR6 569 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 RNASET2O00584 256 aaKnown RBP16.04■□□□□ 0.16
PTPRA-205ENST00000399903 RECKO95980 971 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 SNTB2Q13425 540 aaKnown RBP16.04■□□□□ 0.16
PTPRA-205ENST00000399903 GGTA1PQ4G0N0 100 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 HSD17B12Q53GQ0 312 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 LILRA3Q8N6C8 439 aaPredicted RBP16.04■□□□□ 0.16
PTPRA-205ENST00000399903 DCAF4L2Q8NA75 395 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 KREMEN2Q8NCW0 462 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 OR2T4Q8NH00 348 aa16.04■□□□□ 0.16
PTPRA-205ENST00000399903 TRMT10AQ8TBZ6 339 aaKnown RBP16.04■□□□□ 0.16
PTPRA-205ENST00000399903 CLP1Q92989 425 aaKnown RBP16.04■□□□□ 0.16
PTPRA-205ENST00000399903 SOSTQ9BQB4 213 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms