RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 RIPOR3Q96MK2 946 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SECISBP2Q96T21 854 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 DPH1Q9BZG8 443 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 BEX1Q9HBH7 125 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM27Q9HBJ8 222 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ATG2BQ96BY7 2078 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 IGLV3-16A0A075B6K0 115 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 A0A1W2PS29 197 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 VEGFDO43915 354 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SLC2A10O95528 541 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 GKN3PP0CG01 181 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 GSTM3P21266 225 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 APEX1P27695 318 aaKnown RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 NOS3P29474 1203 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ATP12AP54707 1039 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 CDK3Q00526 305 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 CHRNEQ04844 493 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ST3GAL3Q11203 375 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF542PQ5EBM4 170 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 LILRA6Q6PI73 481 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF517Q6ZMY9 492 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 GLCCI1Q86VQ1 547 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 OR4D11Q8NGI4 311 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SPPL3Q8TCT6 385 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SLC38A5Q8WUX1 472 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 TSACCQ96A04 125 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 CLIP3Q96DZ5 547 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 RBCK1Q9BYM8 510 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF304Q9HCX3 659 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 EXTL2Q9UBQ6 330 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 PAM16Q9Y3D7 125 aa4.65□□□□□ -1.67
SMAD4-202ENST00000398417 PCYT1BQ9Y5K3 369 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-202ENST00000398417 SCN10AQ9Y5Y9 1956 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 A0A1W2PQ09 198 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 NPIPA5E9PKD4 350 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 NPIPA3F8WFD2 350 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 KAT7O95251 611 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SEMG1P04279 462 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 AK4P27144 223 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 HSD17B2P37059 387 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 MVDP53602 400 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SLC3A1Q07837 685 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 DYRK1AQ13627 763 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 C2orf27AQ580R0 203 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ZMAT1Q5H9K5 638 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 NDUFAF5Q5TEU4 345 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 POMZP3Q6PJE2 187 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 NRARPQ7Z6K4 114 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ANKK1Q8NFD2 765 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 NLGN4YQ8NFZ3 816 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM246Q9BRR3 403 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 HES7Q9BYE0 225 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 NPIPA1Q9UND3 350 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CSNK1G3Q9Y6M4 447 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 FAM240BA0A1B0GVZ2 78 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 A8MUA0 341 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 RFXAPO00287 272 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CLEC3BP05452 202 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 MYL9P24844 172 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 MMP12P39900 470 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ARPC4P59998 168 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 PRKCDQ05655 676 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 RUNX3Q13761 415 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 PUM1Q14671 1186 aaKnown RBP eCLIP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TRAM2Q15035 370 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 EIF4HQ15056 248 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 LRIT3Q3SXY7 679 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM31Q5JXX7 168 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 GPR139Q6DWJ6 353 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 FIGNL1Q6PIW4 674 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 PARGQ86W56 976 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 OR10H4Q8NGA5 316 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 HAVCR1Q96D42 359 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TMCO6Q96DC7 493 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 RSPRY1Q96DX4 576 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 LRIG1Q96JA1 1093 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 MOV10Q9HCE1 1003 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 NLGN3Q9NZ94 848 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CNOT2Q9NZN8 540 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 MRPL15Q9P015 296 aaKnown RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 CXXC1Q9P0U4 656 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SPACA6W5XKT8 324 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ABCA1O95477 2261 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 KLF8O95600 359 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 BMP7P18075 431 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 BTBD16Q32M84 506 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 LINC01559Q495D7 138 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 MEDAGQ5VYS4 303 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 BHLHB9Q6PI77 547 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 IL20RBQ6UXL0 311 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF438Q7Z4V0 828 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 NANOGP1Q8N7R0 232 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 GATSQ8NAP1 163 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 OR56A1Q8NGH5 318 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 AKAP1Q92667 903 aaKnown RBP eCLIP4.64□□□□□ -1.67
SMAD4-202ENST00000398417 SLC41A3Q96GZ6 507 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 WACQ9BTA9 647 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 THSD1Q9NS62 852 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 STARD5Q9NSY2 213 aa4.64□□□□□ -1.67
SMAD4-202ENST00000398417 TNFRSF10DQ9UBN6 386 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms