RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 WDR88Q6ZMY6 472 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 CLECL1Q8IZS7 167 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 DACT3Q96B18 629 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-206ENST00000397617 TMEM27Q9HBJ8 222 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 TRAPPC4Q9Y296 219 aa5.49□□□□□ -1.53
PTPRD-206ENST00000397617 H0YGG7 62 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 HCN1O60741 890 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 NME6O75414 186 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 MT-ATP6P00846 226 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 DRD5P21918 477 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 CHMP24386 653 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ELAVL4P26378 380 aaKnown RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ARF3P61204 181 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 MESP2Q0VG99 397 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 CCDC58Q4VC31 144 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 SLC35D3Q5M8T2 416 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 C6orf52Q5T4I8 152 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ULK3Q6PHR2 472 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ENPP6Q6UWR7 440 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ENPP7Q6UWV6 458 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 GPR135Q8IZ08 494 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ACOT12Q8WYK0 555 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 IP6K3Q96PC2 410 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ZC4H2Q9NQZ6 224 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 FBXO4Q9UKT5 387 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 IQCMA0A1B0GVH7 501 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 WBP4O75554 376 aaKnown RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 PRPS1P60891 318 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 EIF3IQ13347 325 aaKnown RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 FHL5Q5TD97 284 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 NXNL2Q5VZ03 156 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 FBXO42Q6P3S6 717 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 LILRA3Q8N6C8 439 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 HLA-CQ95604 372 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 MTG2Q9H4K7 406 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 MKKSQ9NPJ1 570 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 SLC6A13Q9NSD5 602 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 SLC6A5Q9Y345 797 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 CEP192Q8TEP8 1941 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 DOCK10Q96BY6 2186 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 IGKV3D-11A0A0A0MRZ8 115 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 SHISA7A6NL88 538 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 KRT8P05787 483 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 BMP7P18075 431 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 EEF1B2P24534 225 aaKnown RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 GRK5P34947 590 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 HHEXQ03014 270 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 PGBD2Q6P3X8 592 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 MBOAT2Q6ZWT7 520 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 SLC46A3Q7Z3Q1 461 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 C19orf47Q8N9M1 422 aaKnown RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ZSCAN1Q8NBB4 408 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 PLPP5Q8NEB5 264 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 MOCOSQ96EN8 888 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ZC3H10Q96K80 434 aaKnown RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 VSTM2LQ96N03 204 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 KXD1Q9BQD3 176 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 FANCEQ9HB96 536 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 FANCFQ9NPI8 374 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 PCDH15Q96QU1 1955 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 TMEM131Q92545 1883 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 RECKO95980 971 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 HLA-DPB1P04440 258 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 CXCL12P48061 93 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 NCBP2P52298 156 aaKnown RBP eCLIP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 TOMM34Q15785 309 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF528Q3MIS6 628 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 AADACL4Q5VUY2 407 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 DEGS2Q6QHC5 323 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 KIAA1324Q6UXG2 1013 aaKnown RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 TRIM74Q86UV6 250 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 SLC5A8Q8N695 610 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 OR2T33Q8NG76 320 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 OR52L1Q8NGH7 329 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 CUEDC1Q9NWM3 386 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 SERTAD3Q9UJW9 196 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 CBLCQ9ULV8 474 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 KCNK6Q9Y257 313 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 C19orf67A6NJJ6 358 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 INMTO95050 263 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 MED26O95402 600 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 FUCA1P04066 466 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 CFPP27918 469 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 PNLIPRP2P54317 469 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 SNTA1Q13424 505 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 INAQ16352 499 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 HSD17B12Q53GQ0 312 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 FRRS1Q6ZNA5 592 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 TPRA1Q86W33 373 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF366Q8N895 744 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 PNPLA1Q8N8W4 532 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 IL4I1Q96RQ9 567 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 SDF2Q99470 211 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 ITPAQ9BY32 194 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 SLC6A20Q9NP91 592 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 IGHV1OR15-9A0A0B4J2B8 117 aa5.48□□□□□ -1.53
PTPRD-206ENST00000397617 GATBO75879 557 aaKnown RBP5.48□□□□□ -1.53
PTPRD-206ENST00000397617 PCCBP05166 539 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms