RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ADRM1Q16186 407 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 DNAL1Q4LDG9 190 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 IL20RBQ6UXL0 311 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 NET1Q7Z628 596 aaPredicted RBP21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 PTOV1Q86YD1 416 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 SPACA9Q96E40 222 aaPredicted RBP21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 ZNF583Q96ND8 569 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 SDF2Q99470 211 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 G6PC3Q9BUM1 346 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 TMEM38AQ9H6F2 299 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 ZBTB20Q9HC78 741 aaPredicted RBP21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 FBXO34Q9NWN3 711 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 PACSIN3Q9UKS6 424 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 EXPH5Q8NEV8 1989 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 FAM220BPB1ANY3 271 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 C5orf58C9J3I9 102 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 MKRN2OSH3BPM6 223 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 BCHEP06276 602 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 TFPTP0C1Z6 253 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 ATP6V1C1P21283 382 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 CASRP41180 1078 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 HPCAP84074 193 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 ZNF468Q5VIY5 522 aaPredicted RBP21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 OLIG3Q7RTU3 272 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 ZZZ3Q8IYH5 903 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 OR5M3Q8NGP4 307 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 NFKBIDQ8NI38 313 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 SLC38A5Q8WUX1 472 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 DIO2Q92813 273 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 TMEM19Q96HH6 336 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 REXO5Q96IC2 774 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 COL21A1Q96P44 957 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 TRNT1Q96Q11 434 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 ADOQ96SZ5 270 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 UTP23Q9BRU9 249 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 HPF1Q9NWY4 346 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 ANKRD10Q9NXR5 420 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 PLA2G3Q9NZ20 509 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 GMPR2Q9P2T1 348 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 USP22Q9UPT9 525 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 PCDHGA9Q9Y5G4 932 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 ITPR1Q14643 2758 aa21.73■■□□□ 1.07
TSPAN4-203ENST00000397397 WDPCPO95876 746 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 F10P00742 488 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 GSK3BP49841 420 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 HLCSP50747 726 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 PNLIPRP2P54317 469 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 FBXW4P57775 412 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 NCALDP61601 193 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 CDK6Q00534 326 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 OC90Q02509 493 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 RBBP4Q09028 425 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 SCARB2Q14108 478 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 GNA13Q14344 377 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 ZNF630Q2M218 657 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 ZNF791Q3KP31 576 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 SAMD4BQ5PRF9 694 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 GPALPP1Q8IXQ4 340 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 RNF148Q8N7C7 305 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 C11orf65Q8NCR3 313 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 OR2T12Q8NG77 320 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 SMAD5Q99717 465 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 ALG2Q9H553 416 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 OR6C70A6NIJ9 312 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 DNAJA2O60884 412 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 UGT2B11O75310 529 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 STX11O75558 287 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 H6PDO95479 791 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 CHRM4P08173 479 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 CYB561P49447 251 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 CRISP3P54108 245 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 TUBA3CQ13748 450 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 EFR3AQ14156 821 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 MAPK11Q15759 364 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 NTRK2Q16620 822 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 DESI1Q6ICB0 168 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 TUBA3EQ6PEY2 450 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 LRRC74BQ6ZQY2 392 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 ZAR1Q86SH2 424 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 DND1Q8IYX4 353 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 FAM13CQ8NE31 585 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 KCTD14Q9BQ13 255 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 ARHGAP9Q9BRR9 750 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 ZNF350Q9GZX5 532 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 CALML5Q9NZT1 146 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 PRPF19Q9UMS4 504 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 WDR45Q9Y484 360 aa21.72■■□□□ 1.07
TSPAN4-203ENST00000397397 CDK2AP1O14519 115 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 HS6ST1O60243 411 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 FCMRO60667 390 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 ABCB7O75027 752 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 CYP4B1P13584 511 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 CD96P40200 585 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 VMACQ2NL98 169 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 LACTB2Q53H82 288 aaPredicted RBP21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 ERICH5Q6P6B1 374 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 NUP54Q7Z3B4 507 aa21.71■■□□□ 1.07
TSPAN4-203ENST00000397397 MICU2Q8IYU8 434 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms