RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CCDC159P0C7I6 412 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 C8orf89P0DMQ9 161 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 ETS2P15036 469 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 IL7RP16871 459 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 ITGA2P17301 1181 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 MAOAP21397 527 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
CAPN3-207ENST00000397200 RRM2P31350 389 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 POLR2IP36954 125 aaKnown RBP13.88□□□□□ -0.19
CAPN3-207ENST00000397200 STAT5AP42229 794 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 XKP51811 444 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 ID2Q02363 134 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 LAPTM4AQ15012 233 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 LAPTM4BQ86VI4 370 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 SLC38A5Q8WUX1 472 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 ANKRD9Q96BM1 317 aaPredicted RBP13.88□□□□□ -0.19
CAPN3-207ENST00000397200 ZNF578Q96N58 590 aaPredicted RBP13.88□□□□□ -0.19
CAPN3-207ENST00000397200 PTCHD1Q96NR3 888 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 SPSB2Q99619 263 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 VN1R1Q9GZP7 353 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 RSL24D1Q9UHA3 163 aaKnown RBP13.88□□□□□ -0.19
CAPN3-207ENST00000397200 BLOC1S6Q9UL45 172 aa13.88□□□□□ -0.19
CAPN3-207ENST00000397200 RAB40ALP0C0E4 278 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 CSNK2A2P19784 350 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-207ENST00000397200 FEN1P39748 380 aaKnown RBP13.87□□□□□ -0.19
CAPN3-207ENST00000397200 YAP1P46937 504 aaKnown RBP13.87□□□□□ -0.19
CAPN3-207ENST00000397200 CCT3P49368 545 aaKnown RBP13.87□□□□□ -0.19
CAPN3-207ENST00000397200 HMGA2P52926 109 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 ESRRGP62508 458 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 ROR2Q01974 943 aaKnown RBP13.87□□□□□ -0.19
CAPN3-207ENST00000397200 RHAGQ02094 409 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 RAPSNQ13702 412 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 ZNF750Q32MQ0 723 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 BROXQ5VW32 411 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 GPR141Q7Z602 305 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 C7orf57Q8NEG2 295 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 SUN3Q8TAQ9 357 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 NMD3Q96D46 503 aaKnown RBP13.87□□□□□ -0.19
CAPN3-207ENST00000397200 CNRIP1Q96F85 164 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-207ENST00000397200 TMEM19Q96HH6 336 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 SLC35G5Q96KT7 338 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 CRB3Q9BUF7 120 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 VCX3AQ9NNX9 186 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 NECTIN3Q9NQS3 549 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 KRT84Q9NSB2 600 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 KCND3Q9UK17 655 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 MSRB2Q9Y3D2 182 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 PTRH2Q9Y3E5 179 aaKnown RBP13.87□□□□□ -0.19
CAPN3-207ENST00000397200 ENPP4Q9Y6X5 453 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 SPTBN2O15020 2390 aa13.87□□□□□ -0.19
CAPN3-207ENST00000397200 ARRDC5A6NEK1 342 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 IDSB3KWA1 339 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 C21orf140B9A014 251 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 SLC1A7O00341 560 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 PDE9AO76083 593 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 MFN2O95140 757 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 BCHEP06276 602 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 LIPCP11150 499 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 CPMP14384 443 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 PORP16435 677 aaPredicted RBP13.86□□□□□ -0.19
CAPN3-207ENST00000397200 TNFRSF1BP20333 461 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 MPIP34949 423 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 DLSTP36957 453 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 FOLR3P41439 243 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 NCBP2P52298 156 aaKnown RBP eCLIP13.86□□□□□ -0.19
CAPN3-207ENST00000397200 EMP2P54851 167 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 TPD52P55327 224 aaPredicted RBP13.86□□□□□ -0.19
CAPN3-207ENST00000397200 FOXL2P58012 376 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 CXCR4P61073 352 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 RPS15P62841 145 aaKnown RBP13.86□□□□□ -0.19
CAPN3-207ENST00000397200 RPS26P62854 115 aaKnown RBP13.86□□□□□ -0.19
CAPN3-207ENST00000397200 IGLV3-21P80748 117 aaPredicted RBP13.86□□□□□ -0.19
CAPN3-207ENST00000397200 KCNC4Q03721 635 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 BIKQ13323 160 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 DNASE1L3Q13609 305 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 SERTAD2Q14140 314 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 MEP1AQ16819 746 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 TNFAIP8L2Q6P589 184 aaPredicted RBP13.86□□□□□ -0.19
CAPN3-207ENST00000397200 KCTD8Q6ZWB6 473 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 GALNT5Q7Z7M9 940 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 LRRC25Q8N386 305 aaPredicted RBP13.86□□□□□ -0.19
CAPN3-207ENST00000397200 IL22RA1Q8N6P7 574 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 PLPP5Q8NEB5 264 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 ZNF420Q8TAQ5 688 aaPredicted RBP13.86□□□□□ -0.19
CAPN3-207ENST00000397200 MIPOL1Q8TD10 442 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 TSLPQ969D9 159 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 MOAP1Q96BY2 351 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 ZNF681Q96N22 645 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 DOK1Q99704 481 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 PIP5K1AQ99755 562 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 ALOXE3Q9BYJ1 711 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 RUBCNLQ9H714 662 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 SEMA3GQ9NS98 782 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 KIF17Q9P2E2 1029 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 A0A1W2PS29 197 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 PRAMEF27A3QJZ7 478 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 SYNDIG1LA6NDD5 238 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 TGFBR3LH3BV60 316 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 TNFRSF11BO00300 401 aa13.86□□□□□ -0.19
CAPN3-207ENST00000397200 OR10H2O60403 315 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms