RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 WSB2Q9NYS7 404 aaPredicted RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 EBF1Q9UH73 591 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 OR2A25A4D2G3 310 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 METTL12A8MUP2 240 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 LINC01387J3KSC0 135 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GREM1O60565 184 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 NDUFB2O95178 105 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 PAPLNO95428 1278 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF823P16415 610 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CD40LGP29965 261 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FEN1P39748 380 aaKnown RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 RBM34P42696 430 aaKnown RBP3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GIPRP48546 466 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 HYAL1Q12794 435 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GPR50Q13585 617 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GTF2IRD2BQ6EKJ0 949 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FRMPD2BQ6IN97 320 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 GTF2IRD2Q86UP8 949 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 OR2A1Q8NGT9 310 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 FBXL20Q96IG2 436 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CDC6Q99741 560 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 CHCHD6Q9BRQ6 235 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 TTYH2Q9BSA4 534 aa3.19□□□□□ -1.9
VPS13C-203ENST00000395896 VSTM5A8MXK1 200 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 KHNYNO15037 678 aaKnown RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ATP1B1P05026 303 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 OR12D1P0DN82 309 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PGDP52209 483 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 C17orf67Q0P5P2 114 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 SMAD2Q15796 467 aaKnown RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 UGT8Q16880 541 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GPR107Q5VW38 600 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 FAM205BPQ63HN1 556 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 FAM71E1Q6IPT2 247 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MAVSQ7Z434 540 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 FGD2Q7Z6J4 655 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GTPBP3Q969Y2 492 aaKnown RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MS4A6EQ96DS6 147 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM80Q96HE8 168 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GRHPRQ9UBQ7 328 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MKL2Q9ULH7 1088 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 OR6C65A6NJZ3 312 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GPRIN2O60269 458 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CTSLP07711 333 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ERGP11308 486 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ACVR2AP27037 513 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CSRP3P50461 194 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MC1RQ01726 317 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ADPRMQ3LIE5 342 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 AMZ1Q400G9 498 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 C9orf50Q5SZB4 431 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 LIN54Q6MZP7 749 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ARL9Q6T311 187 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF367Q7RTV3 350 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MAMDC2Q7Z304 686 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 C2orf73Q8N5S3 287 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 SLC25A43Q8WUT9 341 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 NAT14Q8WUY8 206 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ZSWIM3Q96MP5 696 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF385DQ9H6B1 395 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF624Q9P2J8 865 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 NKX1-2Q9UD57 310 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PADI1Q9ULC6 663 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PRKAB1Q9Y478 270 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TICRRQ7Z2Z1 1910 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ANHXE9PGG2 379 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TLX2O43763 284 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 DNAJB6O75190 326 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MT-ATP6P00846 226 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GM2AP17900 193 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CD53P19397 219 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 HOXC12P31275 282 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 KIAA0040Q15053 153 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PNLDC1Q8NA58 520 aaKnown RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 VMP1Q96GC9 406 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MYADMQ96S97 322 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM168Q9H0V1 697 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GIN1Q9NXP7 522 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF292O60281 2723 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GLOD5A6NK44 160 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 A8MUI8 341 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 FAM25AB3EWG3 89 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 FAM25CB3EWG5 89 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 FAM25GB3EWG6 89 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 H0YGG7 62 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 FBP2O00757 339 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 GPR39O43194 453 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 NADKO95544 446 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 CRISP1P54107 249 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ARF3P61204 181 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PPP3R1P63098 170 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MYBPC1Q00872 1141 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 KCTD19Q17RG1 926 aaPredicted RBP3.18□□□□□ -1.9
VPS13C-203ENST00000395896 EMC4Q5J8M3 183 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 PHF19Q5T6S3 580 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 LRRN1Q6UXK5 716 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 ATG14Q6ZNE5 492 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 SLC5A8Q8N695 610 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 MGLLQ99685 303 aa3.18□□□□□ -1.9
VPS13C-203ENST00000395896 DCUN1D5Q9BTE7 237 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms