RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 FADS6Q8N9I5 356 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 OR2M3Q8NG83 312 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 SPATA3Q8NHX4 192 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 EXOSC8Q96B26 276 aaKnown RBP19.02■□□□□ 0.64
TRAF4-203ENST00000394925 ERP27Q96DN0 273 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 RAB17Q9H0T7 212 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 RNF122Q9H9V4 155 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 MED11Q9P086 117 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 VPS29Q9UBQ0 182 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 PROCRQ9UNN8 238 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 OR10H1Q9Y4A9 318 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 RPS17P08708 135 aaKnown RBP19.01■□□□□ 0.63
TRAF4-203ENST00000394925 CTAGE8P0CG41 777 aa19.01■□□□□ 0.63
TRAF4-203ENST00000394925 TBXA2RP21731 343 aa19.01■□□□□ 0.63
TRAF4-203ENST00000394925 EVI2BP34910 448 aa19.01■□□□□ 0.63
TRAF4-203ENST00000394925 CLDN20P56880 219 aa19.01■□□□□ 0.63
TRAF4-203ENST00000394925 MRPS22P82650 360 aaKnown RBP19.01■□□□□ 0.63
TRAF4-203ENST00000394925 STX5Q13190 355 aa19.01■□□□□ 0.63
TRAF4-203ENST00000394925 PON3Q15166 354 aa19.01■□□□□ 0.63
TRAF4-203ENST00000394925 EXOC3L2Q2M3D2 409 aa19.01■□□□□ 0.63
TRAF4-203ENST00000394925 CTAGE4Q8IX94 777 aa19.01■□□□□ 0.63
TRAF4-203ENST00000394925 MTBPQ96DY7 904 aa19.01■□□□□ 0.63
TRAF4-203ENST00000394925 MXRA5Q9NR99 2828 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 OR2M5A3KFT3 312 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 H3BML4 177 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 OR4F21O95013 312 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 PSPHP78330 225 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 FGFBP1Q14512 234 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 TCHHL1Q5QJ38 904 aaPredicted RBP19■□□□□ 0.63
TRAF4-203ENST00000394925 SH2D4BQ5SQS7 431 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 ZNF483Q8TF39 744 aaPredicted RBP19■□□□□ 0.63
TRAF4-203ENST00000394925 TMEM171Q8WVE6 324 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 CAVIN3Q969G5 261 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 TAS2R9Q9NYW1 312 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 SENP1Q9P0U3 644 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 MCM8Q9UJA3 840 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 ZNF225Q9UK10 706 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 ZNF175Q9Y473 711 aa19■□□□□ 0.63
TRAF4-203ENST00000394925 PRR14LQ5THK1 2151 aa18.99■□□□□ 0.63
TRAF4-203ENST00000394925 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.99■□□□□ 0.63
TRAF4-203ENST00000394925 THBDP07204 575 aa18.99■□□□□ 0.63
TRAF4-203ENST00000394925 CHN1P15882 459 aa18.99■□□□□ 0.63
TRAF4-203ENST00000394925 ZNF155Q12901 538 aaPredicted RBP18.99■□□□□ 0.63
TRAF4-203ENST00000394925 BEX5Q5H9J7 111 aa18.99■□□□□ 0.63
TRAF4-203ENST00000394925 UBAP2Q5T6F2 1119 aaKnown RBP18.99■□□□□ 0.63
TRAF4-203ENST00000394925 SAMD14Q8IZD0 417 aaPredicted RBP18.99■□□□□ 0.63
TRAF4-203ENST00000394925 OR7G2Q8NG99 324 aa18.99■□□□□ 0.63
TRAF4-203ENST00000394925 UHMK1Q8TAS1 419 aaKnown RBP18.99■□□□□ 0.63
TRAF4-203ENST00000394925 IGFBPL1Q8WX77 278 aa18.99■□□□□ 0.63
TRAF4-203ENST00000394925 SDHAF3Q9NRP4 125 aa18.99■□□□□ 0.63
TRAF4-203ENST00000394925 GIMAP4Q9NUV9 329 aa18.99■□□□□ 0.63
TRAF4-203ENST00000394925 FLRT3Q9NZU0 649 aa18.99■□□□□ 0.63
TRAF4-203ENST00000394925 CHD3Q12873 2000 aaKnown RBP18.98■□□□□ 0.63
TRAF4-203ENST00000394925 UQCRHLA0A096LP55 91 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 GNG14A0A1W2PPG7 69 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 MANBAO00462 879 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 KLF4O43474 513 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 PCDH7O60245 1069 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 FADS1O60427 444 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 PLOD3O60568 738 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 NID1P14543 1247 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 PHBP35232 272 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 MAGEA12P43365 314 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 RPS3AP61247 264 aaKnown RBP18.98■□□□□ 0.63
TRAF4-203ENST00000394925 PSG6Q00889 435 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 GANABQ14697 944 aaKnown RBP18.98■□□□□ 0.63
TRAF4-203ENST00000394925 GUSBP1Q15486 140 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 SGCBQ16585 318 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 TSNAXIP1Q2TAA8 658 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 PPP4R4Q6NUP7 873 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 ZNF704Q6ZNC4 412 aaPredicted RBP18.98■□□□□ 0.63
TRAF4-203ENST00000394925 FAM214BQ7L5A3 538 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 FAM9CQ8IZT9 166 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 CDYL2Q8N8U2 506 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 RTN4RQ9BZR6 473 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 STMN4Q9H169 189 aaPredicted RBP18.98■□□□□ 0.63
TRAF4-203ENST00000394925 PTGES2Q9H7Z7 377 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 SLC35C2Q9NQQ7 365 aa18.98■□□□□ 0.63
TRAF4-203ENST00000394925 ESYT3A0FGR9 886 aa18.97■□□□□ 0.63
TRAF4-203ENST00000394925 LINC01387J3KSC0 135 aa18.97■□□□□ 0.63
TRAF4-203ENST00000394925 AQP8O94778 261 aa18.97■□□□□ 0.63
TRAF4-203ENST00000394925 PLAUP00749 431 aa18.97■□□□□ 0.63
TRAF4-203ENST00000394925 PAX1P15863 534 aa18.97■□□□□ 0.63
TRAF4-203ENST00000394925 ATP5J2P56134 94 aa18.97■□□□□ 0.63
TRAF4-203ENST00000394925 RAE1P78406 368 aaKnown RBP18.97■□□□□ 0.63
TRAF4-203ENST00000394925 DUSP19Q8WTR2 217 aa18.97■□□□□ 0.63
TRAF4-203ENST00000394925 GFM2Q969S9 779 aaKnown RBP18.97■□□□□ 0.63
TRAF4-203ENST00000394925 C1GALT1C1Q96EU7 318 aa18.97■□□□□ 0.63
TRAF4-203ENST00000394925 MRPL57Q9BQC6 102 aaKnown RBP18.97■□□□□ 0.63
TRAF4-203ENST00000394925 CXorf56Q9H5V9 222 aa18.97■□□□□ 0.63
TRAF4-203ENST00000394925 ACSS3Q9H6R3 686 aa18.97■□□□□ 0.63
TRAF4-203ENST00000394925 ZNF701Q9NV72 531 aaPredicted RBP18.97■□□□□ 0.63
TRAF4-203ENST00000394925 ANK3Q12955 4377 aaKnown RBP18.97■□□□□ 0.63
TRAF4-203ENST00000394925 A8MT66 165 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 KRT6AP02538 564 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 KRT6BP04259 564 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 INHBAP08476 426 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 HSD3B1P14060 373 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 HSD3B2P26439 372 aa18.96■□□□□ 0.63
TRAF4-203ENST00000394925 MPIP34949 423 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms