RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ADAMTS15Q8TE58 950 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 TCTEX1D2Q8WW35 142 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 FGF14Q92915 247 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 TMEM80Q96HE8 168 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 HSH2DQ96JZ2 352 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 CAMK1GQ96NX5 476 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 C7orf50Q9BRJ6 194 aaKnown RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 TCEAL7Q9BRU2 100 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 QRSL1Q9H0R6 528 aaKnown RBP5.38□□□□□ -1.55
RFFL-202ENST00000394597 UFSP2Q9NUQ7 469 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 TMEM45AQ9NWC5 275 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 PTTG3PQ9NZH4 202 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 RPS6KB2Q9UBS0 482 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 PPIL1Q9Y3C6 166 aa5.38□□□□□ -1.55
RFFL-202ENST00000394597 TRBV5-4A0A0C4DH59 114 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 OR2A25A4D2G3 310 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 FAM25EA8MYX2 175 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 E7EQ34 232 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 CLDN4O14493 209 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 MOSPD3O75425 235 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 GADD45GO95257 159 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 GLAP06280 429 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 THEGLP0DJG4 465 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 PRG2P13727 222 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ENGP17813 658 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 DRD5P21918 477 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 CDKN2CP42773 168 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 CLDN2P57739 230 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 FBXW4P57775 412 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 PRR5P85299 388 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SLC3A1Q07837 685 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ZNF763Q0D2J5 394 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 HSPB3Q12988 150 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ARHGAP19Q14CB8 494 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 C21orf62-AS1Q17RA5 79 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TOR1AIP1Q5JTV8 583 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 FAM209BQ5JX69 171 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TIGD3Q6B0B8 471 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SHQ1Q6PI26 577 aaKnown RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 TEX261Q6UWH6 196 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SBSNQ6UWP8 590 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 Q6ZSR6 202 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 VN1R5Q7Z5H4 357 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ENTHD1Q8IYW4 607 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TCTE3Q8IZS6 198 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 DNASE1L2Q92874 299 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ZNF419Q96HQ0 510 aaPredicted RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 C3orf30Q96M34 536 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TREX2Q9BQ50 279 aaPredicted RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 TMED9Q9BVK6 235 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 IFT27Q9BW83 186 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 PHF7Q9BWX1 381 aaPredicted RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 TPSD1Q9BZJ3 242 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 REEP4Q9H6H4 257 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 NT5DC2Q9H857 520 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 HRASLS2Q9NWW9 162 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SLAMF8Q9P0V8 285 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 DLGAP4Q9Y2H0 992 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 U3KQ87 197 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ANKRD28O15084 1053 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ARPC5O15511 151 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 CHST10O43529 356 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 LATO43561 262 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 REM1O75628 298 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 GBAP04062 536 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 FABP1P07148 127 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 CTSLP07711 333 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ALDOCP09972 364 aaKnown RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 JUNDP17535 347 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 APEX1P27695 318 aaKnown RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 TIA1P31483 386 aaKnown RBP eCLIP5.37□□□□□ -1.55
RFFL-202ENST00000394597 MPIP34949 423 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 IFNGR2P38484 337 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 OPRD1P41143 372 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SOX3P41225 446 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 PIK3CBP42338 1070 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 AVPR1BP47901 424 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SMSP52788 366 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 AP3S2P59780 193 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ABHD18Q0P651 414 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 C1orf61Q13536 156 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 GPR50Q13585 617 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 GRM7Q14831 915 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 OPCMLQ14982 345 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 KLHL22Q53GT1 634 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 KLHL26Q53HC5 615 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 PTCRAQ6ISU1 281 aaPredicted RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 TMEM81Q6P7N7 255 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 HSDL2Q6YN16 418 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 GDPGP1Q6ZNW5 385 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 ABHD13Q7L211 337 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 SPRED2Q7Z698 418 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 TECPR1Q7Z6L1 1165 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 CDK20Q8IZL9 346 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 LNX2Q8N448 690 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 BOLLQ8N9W6 283 aaKnown RBP5.37□□□□□ -1.55
RFFL-202ENST00000394597 CLRN3Q8NCR9 226 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 BEST4Q8NFU0 473 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 NR4A3Q92570 626 aa5.37□□□□□ -1.55
RFFL-202ENST00000394597 GAL3ST3Q96A11 431 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms