RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 ATXN7L1Q9ULK2 861 aaPredicted RBP13.91□□□□□ -0.18
CCT4-201ENST00000394440 MMACHCQ9Y4U1 282 aa13.91□□□□□ -0.18
CCT4-201ENST00000394440 GXYLT2A0PJZ3 443 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 FRS3O43559 492 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 BRINP1O60477 761 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 GUSBP08236 651 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 CNR2P34972 360 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 GGT2P36268 569 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 OR1D4P47884 311 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 BIKQ13323 160 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 TOP3AQ13472 1001 aaPredicted RBP13.9□□□□□ -0.18
CCT4-201ENST00000394440 DSG2Q14126 1118 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 MAPK14Q16539 360 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 YOD1Q5VVQ6 348 aaPredicted RBP13.9□□□□□ -0.18
CCT4-201ENST00000394440 ZNF773Q6PK81 442 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 Q6ZPB1 254 aaPredicted RBP13.9□□□□□ -0.18
CCT4-201ENST00000394440 ARHGAP22Q7Z5H3 698 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 CEP76Q8TAP6 659 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 NR4A3Q92570 626 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 DIO2Q92813 273 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 FKBP10Q96AY3 582 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 ZNF578Q96N58 590 aaPredicted RBP13.9□□□□□ -0.18
CCT4-201ENST00000394440 PELOQ9BRX2 385 aaKnown RBP13.9□□□□□ -0.18
CCT4-201ENST00000394440 ADNPQ9H2P0 1102 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 ZNF556Q9HAH1 456 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 POLE3Q9NRF9 147 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 DTX4Q9Y2E6 619 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 KMT2EQ8IZD2 1858 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 IGKV3D-11A0A0A0MRZ8 115 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 CPED1A4D0V7 1026 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 DSCR3O14972 297 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 CPNE6O95741 557 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 GABRA3P34903 492 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 CXCR4P61073 352 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 GPR68Q15743 365 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 PGBD2Q6P3X8 592 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 RABEPKQ7Z6M1 372 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 MORN4Q8NDC4 146 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 GTPBP3Q969Y2 492 aaKnown RBP13.9□□□□□ -0.18
CCT4-201ENST00000394440 FNDC11Q9BVV2 318 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 DGCR6LQ9BY27 220 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 KLHL28Q9NXS3 571 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 FTSJ1Q9UET6 329 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 ENOPH1Q9UHY7 261 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 SERTAD3Q9UJW9 196 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 CDC14AQ9UNH5 594 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 MGAT4BQ9UQ53 548 aa13.9□□□□□ -0.18
CCT4-201ENST00000394440 CLDN24A6NM45 220 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 PRAMEF2O60811 474 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 ANGPTL1O95841 491 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 CLPSP04118 112 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 HTR1AP08908 422 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 POU2F1P14859 743 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 LARS2Q15031 903 aaKnown RBP13.89□□□□□ -0.19
CCT4-201ENST00000394440 PODNL1Q6PEZ8 512 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 SLC23A3Q6PIS1 610 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 QSOX2Q6ZRP7 698 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 B3GNT8Q7Z7M8 397 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 ENTHD1Q8IYW4 607 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 OR2I1PQ8NGU4 316 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 SGCDQ92629 289 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 NDC1Q9BTX1 674 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 REV1Q9UBZ9 1251 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 NDOR1Q9UHB4 597 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 SLC13A4Q9UKG4 626 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 BLOC1S6Q9UL45 172 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 ZNF318Q5VUA4 2279 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 KCNK2O95069 426 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 DBIP07108 87 aaKnown RBP13.89□□□□□ -0.19
CCT4-201ENST00000394440 NID1P14543 1247 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 ALAS2P22557 587 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 CCL7P80098 99 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 ZNF267Q14586 743 aaPredicted RBP13.89□□□□□ -0.19
CCT4-201ENST00000394440 FIGNL1Q6PIW4 674 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 BMP8AQ7Z5Y6 402 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 ZAR1Q86SH2 424 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 EID2Q8N6I1 236 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 ZNF615Q8N8J6 731 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 ZBTB44Q8NCP5 570 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 OR4D9Q8NGE8 314 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 APH1BQ8WW43 257 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 NAT6Q93015 286 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 TMIGD2Q96BF3 282 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 CXorf56Q9H5V9 222 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 PAK1IP1Q9NWT1 392 aaPredicted RBP13.89□□□□□ -0.19
CCT4-201ENST00000394440 ZNF232Q9UNY5 417 aa13.89□□□□□ -0.19
CCT4-201ENST00000394440 VPS13AQ96RL7 3174 aa13.88□□□□□ -0.19
CCT4-201ENST00000394440 A0A1B0GX78 115 aa13.88□□□□□ -0.19
CCT4-201ENST00000394440 PEX12O00623 359 aa13.88□□□□□ -0.19
CCT4-201ENST00000394440 OR10H3O60404 316 aa13.88□□□□□ -0.19
CCT4-201ENST00000394440 WBP4O75554 376 aaKnown RBP13.88□□□□□ -0.19
CCT4-201ENST00000394440 RPLP0P05388 317 aaKnown RBP13.88□□□□□ -0.19
CCT4-201ENST00000394440 TRHRP34981 398 aaPredicted RBP13.88□□□□□ -0.19
CCT4-201ENST00000394440 ZNF136P52737 540 aa13.88□□□□□ -0.19
CCT4-201ENST00000394440 EFNA3P52797 238 aa13.88□□□□□ -0.19
CCT4-201ENST00000394440 RGS8P57771 180 aaPredicted RBP13.88□□□□□ -0.19
CCT4-201ENST00000394440 ESRRGP62508 458 aa13.88□□□□□ -0.19
CCT4-201ENST00000394440 PLAURQ03405 335 aa13.88□□□□□ -0.19
CCT4-201ENST00000394440 PROX2Q3B8N5 592 aa13.88□□□□□ -0.19
CCT4-201ENST00000394440 EIPR1Q53HC9 387 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms