RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 FAM192AQ9GZU8 254 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 ENAMQ9NRM1 1142 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 PAK1IP1Q9NWT1 392 aaPredicted RBP17.7■□□□□ 0.42
CLDND1-203ENST00000394181 SERTAD3Q9UJW9 196 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 GMEB2Q9UKD1 530 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 TMCC3Q9ULS5 477 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 POFUT2Q9Y2G5 429 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 HEMK1Q9Y5R4 338 aaPredicted RBP17.7■□□□□ 0.42
CLDND1-203ENST00000394181 SH3PXD2BA1X283 911 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 CPSF4LA6NMK7 179 aaKnown RBP17.7■□□□□ 0.42
CLDND1-203ENST00000394181 A8MUA0 341 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 M0R129 80 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 SYT5O00445 386 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 OR10H3O60404 316 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 STX11O75558 287 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 KCNK2O95069 426 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 NKX2-2O95096 273 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 PNLIPP16233 465 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 ALDH3B2P48448 385 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 TUBA4AP68366 448 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 MFSD4BQ5TF39 518 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 DHRS4L2Q6PKH6 230 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 NPSR1Q6W5P4 371 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 ADAMTS18Q8TE60 1221 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 HOXB13Q92826 284 aaPredicted RBP17.7■□□□□ 0.42
CLDND1-203ENST00000394181 HRASLS5Q96KN8 279 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 CNDP2Q96KP4 475 aaKnown RBP17.7■□□□□ 0.42
CLDND1-203ENST00000394181 VSTM2LQ96N03 204 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 PITX2Q99697 317 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 DPYSL5Q9BPU6 564 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 RHNO1Q9BSD3 238 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 GTPBP2Q9BX10 602 aaKnown RBP17.7■□□□□ 0.42
CLDND1-203ENST00000394181 YTHDF1Q9BYJ9 559 aaKnown RBP17.7■□□□□ 0.42
CLDND1-203ENST00000394181 SAP130Q9H0E3 1048 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 SEMA4GQ9NTN9 838 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 SLC13A4Q9UKG4 626 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 A0A1W2PRQ8 180 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 PTGES3LE9PB15 166 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 CLPSP04118 112 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 HTR1AP08908 422 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 EEF1A1P68104 462 aaKnown RBP17.69■□□□□ 0.42
CLDND1-203ENST00000394181 POU6F2P78424 691 aaPredicted RBP17.69■□□□□ 0.42
CLDND1-203ENST00000394181 DGCR6Q14129 220 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 MINDY4Q4G0A6 757 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 B3GNT8Q7Z7M8 397 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 LAPTM4BQ86VI4 370 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 PEX5LQ8IYB4 626 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 ZNF619Q8N2I2 560 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 FAM181AQ8N9Y4 354 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 PRRC1Q96M27 445 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 YIPF3Q9GZM5 350 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 ZNF556Q9HAH1 456 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 SATB2Q9UPW6 733 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 IGHV5-10-1A0A0J9YXX1 117 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 BLACEA4D250 179 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 H3BSA7 217 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 SLC1A7O00341 560 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 TIAF1O95411 115 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 CPNE6O95741 557 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 THY1P04216 161 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 IFI6P09912 130 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 PRG2P13727 222 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 MAD2L1BPQ15013 274 aaPredicted RBP17.69■□□□□ 0.42
CLDND1-203ENST00000394181 RBM48Q5RL73 367 aaKnown RBP17.69■□□□□ 0.42
CLDND1-203ENST00000394181 PGBD2Q6P3X8 592 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 KMT5CQ86Y97 462 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 ENTHD1Q8IYW4 607 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 SLC38A9Q8NBW4 561 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 PTPMT1Q8WUK0 201 aaPredicted RBP17.69■□□□□ 0.42
CLDND1-203ENST00000394181 CLIP3Q96DZ5 547 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 PHOX2BQ99453 314 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 GPA33Q99795 319 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 LMF2Q9BU23 707 aaKnown RBP17.69■□□□□ 0.42
CLDND1-203ENST00000394181 LRRN3Q9H3W5 708 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 PNO1Q9NRX1 252 aaKnown RBP17.69■□□□□ 0.42
CLDND1-203ENST00000394181 REV1Q9UBZ9 1251 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 FBXO4Q9UKT5 387 aa17.69■□□□□ 0.42
CLDND1-203ENST00000394181 FAAHO00519 579 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 ARHGAP33O14559 1287 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 COQ9O75208 318 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 WBP4O75554 376 aaKnown RBP17.68■□□□□ 0.42
CLDND1-203ENST00000394181 GKN3PP0CG01 181 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 TNNI3P19429 210 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 MAPK10P53779 464 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 TCEAL6Q6IPX3 200 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 APLFQ8IW19 511 aaPredicted RBP17.68■□□□□ 0.42
CLDND1-203ENST00000394181 MORN4Q8NDC4 146 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 C16orf52Q8NHV5 167 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 APH1BQ8WW43 257 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 TCEAL3Q969E4 200 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 APOL4Q9BPW4 351 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 RBM38Q9H0Z9 239 aaKnown RBP17.68■□□□□ 0.42
CLDND1-203ENST00000394181 CXorf56Q9H5V9 222 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 ZNF304Q9HCX3 659 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 TUBA8Q9NY65 449 aaPredicted RBP17.68■□□□□ 0.42
CLDND1-203ENST00000394181 ZNF232Q9UNY5 417 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 RNF6Q9Y252 685 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 IFT52Q9Y366 437 aa17.68■□□□□ 0.42
CLDND1-203ENST00000394181 ARRDC5A6NEK1 342 aa17.67■□□□□ 0.42
CLDND1-203ENST00000394181 C17orf105B2RV13 164 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms