RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 LCP2Q13094 533 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 GLYR1Q49A26 553 aaPredicted RBP15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 GLE1Q53GS7 698 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 OR5M10Q6IEU7 315 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 PRSS57Q6UWY2 283 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 SLC44A2Q8IWA5 706 aaPredicted RBP15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 MEIOBQ8N635 442 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 OR7G2Q8NG99 324 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 OR4K17Q8NGC6 315 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 EXOSC8Q96B26 276 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 L3HYPDHQ96EM0 354 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 APIPQ96GX9 242 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 TMEM216Q9P0N5 145 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 PPP4R1LQ9P1A2 415 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 ZNF175Q9Y473 711 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 OR10H1Q9Y4A9 318 aa15.8■□□□□ 0.12
SNRPA1-202ENST00000394082 H3BQF6 201 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 EMC8O43402 210 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 FADS1O60427 444 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 PSMG1O95456 288 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 CTAGE8P0CG41 777 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 CD8BP10966 210 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 CD79BP40259 229 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 NAA20P61599 178 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 LTBQ06643 244 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 ZNF763Q0D2J5 394 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 POU4F3Q15319 338 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 TEX35Q5T0J7 233 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 P4HA3Q7Z4N8 544 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 CTAGE4Q8IX94 777 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 OR2M3Q8NG83 312 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 FAM76AQ8TAV0 307 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.79■□□□□ 0.127e-11■■■■□ 26.3
SNRPA1-202ENST00000394082 SLC39A3Q9BRY0 314 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 PTGES2Q9H7Z7 377 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 RNF122Q9H9V4 155 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 HHATLQ9HCP6 504 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 FAM120CQ9NX05 1096 aaKnown RBP15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 SENP1Q9P0U3 644 aa15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 MRTO4Q9UKD2 239 aaKnown RBP15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 C19orf53Q9UNZ5 99 aaPredicted RBP15.79■□□□□ 0.12
SNRPA1-202ENST00000394082 EXOC1LA0A1B0GW35 172 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 TTC36A6NLP5 189 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 DEFB108AA8MXU0 73 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 GSTA1P08263 222 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 ANXA4P09525 319 aaPredicted RBP15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 FPR1P21462 350 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 CRYGSP22914 178 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 CPOXP36551 454 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 KIR2DL2P43627 348 aaPredicted RBP15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 CLDN15P56746 228 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 FAM27E3Q08E93 113 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 PLXDC2Q6UX71 529 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 OR2L13Q8N349 312 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 C17orf53Q8N3J3 647 aaPredicted RBP15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 OR4N2Q8NGD1 307 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 UHMK1Q8TAS1 419 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 ACMSDQ8TDX5 336 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 IFT81Q8WYA0 676 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 CAVIN3Q969G5 261 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 EFHD2Q96C19 240 aaPredicted RBP15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 PGM2Q96G03 612 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 METTL2AQ96IZ6 378 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 WFIKKN1Q96NZ8 548 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 BBS4Q96RK4 519 aa15.78■□□□□ 0.12
SNRPA1-202ENST00000394082 IGLV3-32A0A0A0MS00 114 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 SMNDC1O75940 238 aaKnown RBP eCLIP15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 CGAP01215 116 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 GCAP28676 217 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 ADSLP30566 484 aaPredicted RBP15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 UGT2B10P36537 528 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 CLK3P49761 638 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 HTR6P50406 440 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 PSMD4P55036 377 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 GUSBP1Q15486 140 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 DECR1Q16698 335 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 VWA1Q6PCB0 445 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 ZNF474Q6S9Z5 364 aaPredicted RBP15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 BTLAQ7Z6A9 289 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 ZNF592Q92610 1267 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 CCDC126Q96EE4 140 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 PIGQQ9BRB3 760 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 DSN1Q9H410 356 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 Q9N2J8 555 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 AP4B1Q9Y6B7 739 aa15.77■□□□□ 0.12
SNRPA1-202ENST00000394082 C16orf97H3BN30 126 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 UPK1AO00322 258 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 SIAH2O43255 324 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 NME6O75414 186 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 URI1O94763 535 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 IL33O95760 270 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 HEXAP06865 529 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 FCGR2AP12318 317 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 HK1P19367 917 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 ZNF155Q12901 538 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 RAET1LQ5VY80 246 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 FAM71E1Q6IPT2 247 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 IKBIPQ70UQ0 350 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 TRIM46Q7Z4K8 759 aa15.76■□□□□ 0.11
SNRPA1-202ENST00000394082 METTL25Q8N6Q8 603 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms