RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 METTL25Q8N6Q8 603 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 MRRFQ96E11 262 aaKnown RBP13.82□□□□□ -0.2
CHMP3-202ENST00000393773 HBEGFQ99075 208 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 FAIM2Q9BWQ8 316 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 RTN4RQ9BZR6 473 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 DSN1Q9H410 356 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 XPR1Q9UBH6 696 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 PROCRQ9UNN8 238 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 ZNF337Q9Y3M9 751 aa13.82□□□□□ -0.2
CHMP3-202ENST00000393773 OR2M5A3KFT3 312 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 PPP6CO00743 305 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 KLF4O43474 513 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 FADS1O60427 444 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 IL3P08700 152 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 HK1P19367 917 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 TYK2P29597 1187 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 CLDN20P56880 219 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 EEFSECP57772 596 aaKnown RBP13.81□□□□□ -0.2
CHMP3-202ENST00000393773 CAV1Q03135 178 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 C2orf54Q08AI8 447 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 ERCC6LQ2NKX8 1250 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 BEX5Q5H9J7 111 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 UBAP2Q5T6F2 1119 aaKnown RBP13.81□□□□□ -0.2
CHMP3-202ENST00000393773 ANKRD34AQ69YU3 496 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 MILR1Q7Z6M3 343 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 CCDC116Q8IYX3 515 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 SPATA4Q8NEY3 305 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 OR7G2Q8NG99 324 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 OR5M1Q8NGP8 315 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 ZNF483Q8TF39 744 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-202ENST00000393773 TMEM171Q8WVE6 324 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 SELENOMQ8WWX9 145 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 VPS11Q9H270 941 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 FLRT3Q9NZU0 649 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 ZNF225Q9UK10 706 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 TMCO1Q9UM00 188 aa13.81□□□□□ -0.2
CHMP3-202ENST00000393773 H3BML4 177 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 PLOD3O60568 738 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 TMCC2O75069 709 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 AQP8O94778 261 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 PLAUP00749 431 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 FCGR2AP12318 317 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 TBXA2RP21731 343 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 RAE1P78406 368 aaKnown RBP13.8□□□□□ -0.2
CHMP3-202ENST00000393773 PSG6Q00889 435 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 OCRLQ01968 901 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 ZNF155Q12901 538 aaPredicted RBP13.8□□□□□ -0.2
CHMP3-202ENST00000393773 TNK1Q13470 666 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 UAP1Q16222 522 aaPredicted RBP13.8□□□□□ -0.2
CHMP3-202ENST00000393773 TCHHL1Q5QJ38 904 aaPredicted RBP13.8□□□□□ -0.2
CHMP3-202ENST00000393773 FAM214BQ7L5A3 538 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 GGNQ86UU5 652 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 SLC44A2Q8IWA5 706 aaPredicted RBP13.8□□□□□ -0.2
CHMP3-202ENST00000393773 NANOS1Q8WY41 292 aaKnown RBP13.8□□□□□ -0.2
CHMP3-202ENST00000393773 C1GALT1C1Q96EU7 318 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 TMEM204Q9BSN7 226 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 KLHL4Q9C0H6 718 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 CXorf56Q9H5V9 222 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 PFDN4Q9NQP4 134 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 MED11Q9P086 117 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 MCM8Q9UJA3 840 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 SNX6Q9UNH7 406 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 ABCG2Q9UNQ0 655 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 FREM1Q5H8C1 2179 aa13.8□□□□□ -0.2
CHMP3-202ENST00000393773 LINC01387J3KSC0 135 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 HS3ST1O14792 307 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 OTCP00480 354 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 RBP1P09455 135 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 PPP3CBP16298 524 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 MRPS22P82650 360 aaKnown RBP13.79□□□□□ -0.2
CHMP3-202ENST00000393773 DMTNQ08495 405 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 STX5Q13190 355 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 EXOC3L2Q2M3D2 409 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 TMEM44Q2T9K0 475 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 STAC2Q6ZMT1 411 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 SH2D5Q6ZV89 423 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 ZNF611Q8N823 705 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 OR6K3Q8NGY3 331 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 EXOSC8Q96B26 276 aaKnown RBP13.79□□□□□ -0.2
CHMP3-202ENST00000393773 MTBPQ96DY7 904 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 C1QTNF3Q9BXJ4 246 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 VPS29Q9UBQ0 182 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 OR10H1Q9Y4A9 318 aa13.79□□□□□ -0.2
CHMP3-202ENST00000393773 A8MT66 165 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 PCDH7O60245 1069 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 SMIM24O75264 130 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 PSMG1O95456 288 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 ESRRBO95718 433 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 SBK3P0C264 359 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 HSD3B1P14060 373 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 CHN1P15882 459 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 TSPAN8P19075 237 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 HSD3B2P26439 372 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 SLC6A8P48029 635 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 NR1H2P55055 460 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 CDH13P55290 713 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 ATP5J2P56134 94 aa13.78□□□□□ -0.2
CHMP3-202ENST00000393773 CSTF3Q12996 717 aaKnown RBP13.78□□□□□ -0.2
CHMP3-202ENST00000393773 FAM9CQ8IZT9 166 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms