RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ZNF362Q5T0B9 420 aaPredicted RBP13.93□□□□□ -0.18
MKS1-202ENST00000393119 THAP5Q7Z6K1 395 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 PLXDC1Q8IUK5 500 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 SLC38A9Q8NBW4 561 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 CHDHQ8NE62 594 aaPredicted RBP13.93□□□□□ -0.18
MKS1-202ENST00000393119 PHF10Q8WUB8 498 aaKnown RBP13.93□□□□□ -0.18
MKS1-202ENST00000393119 TRUB1Q8WWH5 349 aaKnown RBP13.93□□□□□ -0.18
MKS1-202ENST00000393119 MOAP1Q96BY2 351 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 CTHRC1Q96CG8 243 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 LMF1Q96S06 567 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 CNPPD1Q9BV87 410 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 ING2Q9H160 280 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 BCL2L10Q9HD36 194 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 LGI1O95970 557 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 RPP38P78345 283 aaKnown RBP13.93□□□□□ -0.18
MKS1-202ENST00000393119 FAM53BQ14153 422 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 ELOAQ14241 798 aaKnown RBP13.93□□□□□ -0.18
MKS1-202ENST00000393119 NDUFA9Q16795 377 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 HEPHL1Q6MZM0 1159 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 SLC30A8Q8IWU4 369 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 C8orf59Q8N0T1 100 aaPredicted RBP13.93□□□□□ -0.18
MKS1-202ENST00000393119 VWA5B2Q8N398 1253 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 AQP11Q8NBQ7 271 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 OR52P1PQ8NH57 321 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 BBS10Q8TAM1 723 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 SLC7A13Q8TCU3 470 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 RIT1Q92963 219 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 RBM18Q96H35 190 aaKnown RBP13.93□□□□□ -0.18
MKS1-202ENST00000393119 ZNF347Q96SE7 839 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 RAB33BQ9H082 229 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 NLGN3Q9NZ94 848 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 PTGFRNQ9P2B2 879 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 ERGIC3Q9Y282 383 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 CORINQ9Y5Q5 1042 aa13.93□□□□□ -0.18
MKS1-202ENST00000393119 A0A0G2JPF8 293 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 CPSF4LA6NMK7 179 aaKnown RBP13.92□□□□□ -0.18
MKS1-202ENST00000393119 HNRNPCL2B2RXH8 293 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 HNRNPCL3B7ZW38 293 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 SOX14O95416 240 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 CPNE6O95741 557 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 IGKV1D-16P01601 117 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 IFNA16P05015 189 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 RPLP0P05388 317 aaKnown RBP13.92□□□□□ -0.18
MKS1-202ENST00000393119 GKN3PP0CG01 181 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 SLC35E2P0CK97 266 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 HNRNPCL4P0DMR1 293 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 PRG2P13727 222 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 NPRL3Q12980 569 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 MINDY4Q4G0A6 757 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 CCDC92Q53HC0 331 aaPredicted RBP13.92□□□□□ -0.18
MKS1-202ENST00000393119 ZNF691Q5VV52 312 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 KRT73Q86Y46 540 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 GPA33Q99795 319 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 NAA50Q9GZZ1 169 aaKnown RBP13.92□□□□□ -0.18
MKS1-202ENST00000393119 FGF21Q9NSA1 209 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 MAN2C1Q9NTJ4 1040 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 PAK1IP1Q9NWT1 392 aaPredicted RBP13.92□□□□□ -0.18
MKS1-202ENST00000393119 ERVK-19Q9WJR5 959 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 WDR45Q9Y484 360 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 ORC6Q9Y5N6 252 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 DSPPQ9NZW4 1301 aa13.92□□□□□ -0.18
MKS1-202ENST00000393119 PTGES3LE9PB15 166 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 PLOD3O60568 738 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 CTNSO60931 367 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 PDE9AO76083 593 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 ALPPP05187 535 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 ITGA2P17301 1181 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 ELAVL4P26378 380 aaKnown RBP13.91□□□□□ -0.18
MKS1-202ENST00000393119 EMDP50402 254 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 RAD23AP54725 363 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 PSG6Q00889 435 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 ZNF155Q12901 538 aaPredicted RBP13.91□□□□□ -0.18
MKS1-202ENST00000393119 GRM7Q14831 915 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 DCST2Q5T1A1 773 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 ATAD3BQ5T9A4 648 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 TTC23Q5W5X9 447 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 GALNT12Q8IXK2 581 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 D2HGDHQ8N465 521 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 BPIFB6Q8NFQ5 453 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 OR4C6Q8NH72 309 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 TRNT1Q96Q11 434 aaKnown RBP13.91□□□□□ -0.18
MKS1-202ENST00000393119 TUBA1CQ9BQE3 449 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 FITM1A5D6W6 292 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 SLC16A6O15403 523 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 THY1P04216 161 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 NFATC3Q12968 1075 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 FAM69BQ5VUD6 431 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 FAAH2Q6GMR7 532 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 ZNF770Q6IQ21 691 aaPredicted RBP13.91□□□□□ -0.18
MKS1-202ENST00000393119 TAGAPQ8N103 731 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 COX18Q8N8Q8 333 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 DTWD2Q8NBA8 298 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 ZNF501Q96CX3 271 aaPredicted RBP13.91□□□□□ -0.18
MKS1-202ENST00000393119 SLC41A2Q96JW4 573 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 PTCHD1Q96NR3 888 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 ARMC7Q9H6L4 198 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 AMBNQ9NP70 447 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 PNO1Q9NRX1 252 aaKnown RBP13.91□□□□□ -0.18
MKS1-202ENST00000393119 LANCL2Q9NS86 450 aa13.91□□□□□ -0.18
MKS1-202ENST00000393119 KCND3Q9UK17 655 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms