RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 OR4K14Q8NGD5 310 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 ELP4Q96EB1 424 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 PHB2Q99623 299 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 OR6C2Q9NZP2 312 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 KIAA0100Q14667 2235 aaKnown RBP18.65■□□□□ 0.58
SHANK1-203ENST00000391813 EEF1E1-BLOC1S5C9J1V9 151 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 SGCEO43556 437 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 ZNF616Q08AN1 781 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 TUBB3Q13509 450 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 NRROSQ86YC3 692 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 NUP43Q8NFH3 380 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 ZDHHC1Q8WTX9 485 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 PSD2Q9BQI7 771 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 DHDHQ9UQ10 334 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 TMEM150CB9EJG8 249 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 PPP6CO00743 305 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 HCKP08631 526 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 SSTR2P30874 369 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 POU6F2P78424 691 aaPredicted RBP18.65■□□□□ 0.58
SHANK1-203ENST00000391813 MTFR2Q6P444 385 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 Q6ZVL8 140 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 AK1P00568 194 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 UGT2B7P16662 529 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 AADACL4Q5VUY2 407 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 ALG1LQ6GMV1 187 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 SHFQ7M4L6 423 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 KCTD20Q7Z5Y7 419 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 TMEM173Q86WV6 379 aaPredicted RBP18.65■□□□□ 0.58
SHANK1-203ENST00000391813 RAB7BQ96AH8 199 aa18.65■□□□□ 0.58
SHANK1-203ENST00000391813 C1orf226A1L170 272 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 HEPACAM2A8MVW5 462 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 SCG5P05408 212 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 ENDOUP21128 410 aaKnown RBP18.64■□□□□ 0.57
SHANK1-203ENST00000391813 GPR143P51810 404 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 RPS27AP62979 156 aaKnown RBP18.64■□□□□ 0.57
SHANK1-203ENST00000391813 UBA52P62987 128 aaKnown RBP18.64■□□□□ 0.57
SHANK1-203ENST00000391813 CLLU1OSQ5K130 101 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 GPRIN1Q7Z2K8 1008 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 C12orf76Q8N812 135 aaPredicted RBP18.64■□□□□ 0.57
SHANK1-203ENST00000391813 CYB5D2Q8WUJ1 264 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 ZNF649Q9BS31 505 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 WASH6PQ9NQA3 447 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 SLAMF8Q9P0V8 285 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 MYH4Q9Y623 1939 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 SCN7AQ01118 1682 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 FABP7O15540 132 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 TSPAN15O95858 294 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 HERV-K104P61576 105 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 RPS26P62854 115 aaKnown RBP18.64■□□□□ 0.57
SHANK1-203ENST00000391813 OPCMLQ14982 345 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 PCGF3Q3KNV8 242 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 COMMD6Q7Z4G1 85 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 LRRC56Q8IYG6 542 aaPredicted RBP18.64■□□□□ 0.57
SHANK1-203ENST00000391813 ACVR1CQ8NER5 493 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 BRIX1Q8TDN6 353 aaKnown RBP18.64■□□□□ 0.57
SHANK1-203ENST00000391813 HIST1H2AAQ96QV6 131 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 URM1Q9BTM9 101 aaKnown RBP18.64■□□□□ 0.57
SHANK1-203ENST00000391813 ERCC1P07992 297 aaPredicted RBP18.64■□□□□ 0.57
SHANK1-203ENST00000391813 ACTR1BP42025 376 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 GPR4P46093 362 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 ACTR1AP61163 376 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 MEF2AQ02078 507 aaPredicted RBP18.64■□□□□ 0.57
SHANK1-203ENST00000391813 LAX1Q8IWV1 398 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 OR5W2Q8NH69 310 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 ZIC5Q96T25 663 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 RXFP3Q9NSD7 469 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 TPT1P13693 172 aaKnown RBP18.64■□□□□ 0.57
SHANK1-203ENST00000391813 MAOAP21397 527 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 ZNF565Q8N9K5 539 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 C16orf78Q8WTQ4 265 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 CENPOQ9BU64 300 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 EMC7Q9NPA0 242 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 CD207Q9UJ71 328 aa18.64■□□□□ 0.57
SHANK1-203ENST00000391813 DNMT3AQ9Y6K1 912 aaPredicted RBP18.64■□□□□ 0.57
SHANK1-203ENST00000391813 A0A1W2PPL8 197 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 MEGF11A6BM72 1044 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 WASH3PC4AMC7 463 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 TGM5O43548 720 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 CACNG3O60359 315 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 C1QBP02746 253 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 DAPP51397 102 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 RAB11BQ15907 218 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 DECR1Q16698 335 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 DPY19L2P1Q6NXN4 242 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 PXKQ7Z7A4 578 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 CPOQ8IVL8 374 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 CCDC54Q8NEL0 328 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 ELP5Q8TE02 316 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 NTN4Q9HB63 628 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 PHYHO14832 338 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 PEX14O75381 377 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 DLSTP36957 453 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 TBPL1P62380 186 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 TRAM1L1Q8N609 369 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 FAM46AQ96IP4 442 aaKnown RBP18.63■□□□□ 0.57
SHANK1-203ENST00000391813 CPPED1Q9BRF8 314 aaPredicted RBP18.63■□□□□ 0.57
SHANK1-203ENST00000391813 UQCC2Q9BRT2 126 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 RASD1Q9Y272 281 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 OR2A25A4D2G3 310 aa18.63■□□□□ 0.57
SHANK1-203ENST00000391813 TSPAN6O43657 245 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms