RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 RABGAP1LQ5R372 815 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 DNLZQ5SXM8 178 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 HYIQ5T013 277 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ERMARDQ5T6L9 678 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 METTL11BQ5VVY1 283 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 RAET1LQ5VY80 246 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 SHEQ5VZ18 495 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ZNF57Q68EA5 555 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 TXNRD3NBQ6F5E7 133 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 RTL6Q6ICC9 239 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 NANOGP8Q6NSW7 305 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ZNF880Q6PDB4 577 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 UNC5DQ6UXZ4 953 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 DNM1P46Q6ZS02 220 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 C1orf122Q6ZSJ8 110 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 FAM220AQ7Z4H9 259 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 TSEN54Q7Z6J9 526 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 DNAJB7Q7Z6W7 309 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 DZIP1Q86YF9 867 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 THEM5Q8N1Q8 247 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 IQUBQ8NA54 791 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 KCTD6Q8NC69 237 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 OR2A12Q8NGT7 310 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 OR9A1PQ8NGU1 263 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 OR4L1Q8NH43 312 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 OCC1Q8TAD7 63 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 RAET1EQ8TD07 263 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 UBLCP1Q8WVY7 318 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 CKAP2Q8WWK9 683 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 GIMAP1Q8WWP7 306 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 LHX4Q969G2 390 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ULK4Q96C45 1275 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 PGAP3Q96FM1 320 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 COL21A1Q96P44 957 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 OR2M2Q96R28 347 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 CPXM1Q96SM3 734 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 S1PR3Q99500 378 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 KLF6Q99612 283 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 TXN2Q99757 166 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ARHGDIGQ99819 225 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 FOXC2Q99958 501 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 RASL11BQ9BPW5 248 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ZNF559Q9BR84 538 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ATG101Q9BSB4 218 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 FEM1AQ9BSK4 669 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 POLR2J2Q9GZM3 115 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 LSG1Q9H089 658 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 POLR2J3Q9H1A7 115 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 SLC26A1Q9H2B4 701 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 CCDC68Q9H2F9 335 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 IFI27L2Q9H2X8 130 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ZNF430Q9H8G1 570 aaPredicted RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ZDHHC11Q9H8X9 412 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 LMAN1LQ9HAT1 526 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 EML4Q9HC35 981 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 SH2D2AQ9NP31 389 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 LHX9Q9NQ69 397 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 SIRT7Q9NRC8 400 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 PNO1Q9NRX1 252 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 MRPL17Q9NRX2 175 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 GPR173Q9NS66 373 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 PNPLA3Q9NST1 481 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 BLOC1S4Q9NUP1 217 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ELOVL2Q9NXB9 296 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 GDAP2Q9NXN4 497 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 OR1A1Q9P1Q5 309 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 MORF4L1Q9UBU8 362 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 NUFIP1Q9UHK0 495 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 TEKT2Q9UIF3 430 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 PSORS1C1Q9UIG5 152 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 GGA2Q9UJY4 613 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 MRTO4Q9UKD2 239 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 UBQLN1Q9UMX0 589 aaKnown RBP0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ERVK-19Q9WJR5 959 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 ITM2BQ9Y287 266 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 SVILO95425 2214 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 SHROOM3Q8TF72 1996 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 KAT6BQ8WYB5 2073 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 SYNJ2O15056 1496 aa0.15□□□□□ -2.39
SNORD28-201ENST00000384706 TENM3Q9P273 2699 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 LTBP4Q8N2S1 1624 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 IGKV2-24A0A0C4DH68 120 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 TRBV7-9A0A0J9YWB2 115 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 SMIM28A0A1B0GU29 152 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 C5orf52A6NGY3 159 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 C16orf90A8MZG2 172 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 KBTBD13C9JR72 458 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 H0YIG0 161 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 CCDC188H7C350 402 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 K7N7A8 449 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 SH2D1BO14796 132 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 CFLARO15519 480 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 ANGPTL7O43827 346 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 FAM189A1O60320 539 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 OR10H3O60404 316 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 SELENOFO60613 162 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 SDC3O75056 442 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 DEDDO75618 318 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 SCRG1O75711 98 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 RAD51DO75771 328 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms