RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 ATAD1Q8NBU5 361 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 ZNF548Q8NEK5 533 aaPredicted RBP5.43□□□□□ -1.54
RFC1-202ENST00000381897 OR2D3Q8NGH3 330 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 GAL3ST3Q96A11 431 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 TCTN2Q96GX1 697 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 APIPQ96GX9 242 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 RBM18Q96H35 190 aaKnown RBP5.43□□□□□ -1.54
RFC1-202ENST00000381897 MYO19Q96H55 970 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 AGO3Q9H9G7 860 aaKnown RBP5.43□□□□□ -1.54
RFC1-202ENST00000381897 IL1RAPQ9NPH3 570 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 TREX1Q9NSU2 369 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 CRLS1Q9UJA2 301 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 ALG5Q9Y673 324 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 PIAS3Q9Y6X2 628 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 FOCADQ5VW36 1801 aa5.43□□□□□ -1.54
RFC1-202ENST00000381897 XIRP1Q702N8 1843 aaKnown RBP5.43□□□□□ -1.54
RFC1-202ENST00000381897 A0A087WZY1 265 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 WASHC1A8K0Z3 465 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 H0Y8X5 98 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 SLC28A2O43868 658 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 GJB3O75712 270 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 RAB36O95755 333 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 IFNW1P05000 195 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 HLA-DQB2P05538 268 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 PRPS1L1P21108 318 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 SCNN1GP51170 649 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 TPMTP51580 245 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 CLCNKBP51801 687 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 DAOAP59103 153 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 SUMO2P61956 95 aaKnown RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 BTG1P62324 171 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 HFEQ30201 348 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 ZNF311Q5JNZ3 666 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 PXDC1Q5TGL8 231 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 FAM46CQ5VWP2 391 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 IL20RBQ6UXL0 311 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 COMMD2Q86X83 199 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 OR4F6Q8NGB9 312 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 OR4C15Q8NGM1 316 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 GEMIN6Q8WXD5 167 aaKnown RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 KTI12Q96EK9 354 aaPredicted RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 C1orf74Q96LT6 269 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 DPYSL5Q9BPU6 564 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 ZNF436Q9C0F3 470 aaPredicted RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 AMBNQ9NP70 447 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 PIGVQ9NUD9 493 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 TMLHEQ9NVH6 421 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 GMPR2Q9P2T1 348 aaKnown RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 ZNF282Q9UDV7 671 aaPredicted RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 SLCO3A1Q9UIG8 710 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 DKKL1Q9UK85 242 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 RALYQ9UKM9 306 aaKnown RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 LHX6Q9UPM6 363 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 SLX4Q8IY92 1834 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 IQCMA0A1B0GVH7 501 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 GNG14A0A1W2PPG7 69 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 HYKKA2RU49 373 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 FXYD1O00168 92 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 CLIC1O00299 241 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 ENTPD6O75354 484 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 GADD45GO95257 159 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 S1PR4O95977 384 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 OPN1LWP04000 364 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 HLA-DPB1P04440 258 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 ADORA3P0DMS8 318 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 SRCP12931 536 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 LPOP22079 712 aaPredicted RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 CD68P34810 354 aaPredicted RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 GJA5P36382 358 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 LIPAP38571 399 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 RPIAP49247 311 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 RPS7P62081 194 aaKnown RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 FLI1Q01543 452 aaPredicted RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 SPEM2Q0P670 501 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 PTGR1Q14914 329 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 SPHARQ15513 63 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 VMACQ2NL98 169 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 RAB6CQ53S08 254 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 SHEQ5VZ18 495 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 KDM4DQ6B0I6 523 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 SLC35F2Q8IXU6 374 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 LINC00471Q8N535 108 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 C11orf24Q96F05 449 aaPredicted RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 METTL2AQ96IZ6 378 aaKnown RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 ST6GAL2Q96JF0 529 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 HRASLS5Q96KN8 279 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 RPL10LQ96L21 214 aaKnown RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 MICU1Q9BPX6 476 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 RAB6CQ9H0N0 254 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 NTN4Q9HB63 628 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 TLR9Q9NR96 1032 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 FAM120CQ9NX05 1096 aaKnown RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 GPR83Q9NYM4 423 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 HCN3Q9P1Z3 774 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 IKZF2Q9UKS7 526 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 TMPRSS11EQ9UL52 423 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 CA5BQ9Y2D0 317 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 EXOSC1Q9Y3B2 195 aaKnown RBP5.42□□□□□ -1.54
RFC1-202ENST00000381897 NUBP2Q9Y5Y2 271 aa5.42□□□□□ -1.54
RFC1-202ENST00000381897 PTGDR2Q9Y5Y4 395 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms