RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 IRF7Q92985 503 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 NEIL2Q969S2 332 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 THSD1Q9NS62 852 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 REV1Q9UBZ9 1251 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 SLC25A13Q9UJS0 675 aa13.03□□□□□ -0.32
SDC1-202ENST00000381150 HIDE1A8MVS5 230 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 H0YC42 278 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 TRIM77I1YAP6 450 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 EIF4EP06730 217 aaKnown RBP13.02□□□□□ -0.32
SDC1-202ENST00000381150 C8GP07360 202 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 MPC1LP0DKB6 136 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 PIPP12273 146 aaPredicted RBP13.02□□□□□ -0.32
SDC1-202ENST00000381150 ZNF8P17098 575 aaPredicted RBP13.02□□□□□ -0.32
SDC1-202ENST00000381150 MMP11P24347 488 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 RNF144AP50876 292 aaPredicted RBP13.02□□□□□ -0.32
SDC1-202ENST00000381150 HTRA4P83105 476 aaPredicted RBP13.02□□□□□ -0.32
SDC1-202ENST00000381150 ZNF763Q0D2J5 394 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 TMEM159Q96B96 161 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 MRGPRX3Q96LB0 322 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 TEFMQ96QE5 360 aaKnown RBP13.02□□□□□ -0.32
SDC1-202ENST00000381150 GSX2Q9BZM3 304 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 ABCG4Q9H172 646 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 CHD7Q9P2D1 2997 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 DIMT1Q9UNQ2 313 aaKnown RBP13.02□□□□□ -0.32
SDC1-202ENST00000381150 HCFC2Q9Y5Z7 792 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 IRAK3Q9Y616 596 aa13.02□□□□□ -0.32
SDC1-202ENST00000381150 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.02□□□□□ -0.33
SDC1-202ENST00000381150 ZC3H12DA2A288 527 aaKnown RBP13.02□□□□□ -0.33
SDC1-202ENST00000381150 PRMT3O60678 531 aa13.02□□□□□ -0.33
SDC1-202ENST00000381150 TCRBP04435 133 aa13.02□□□□□ -0.33
SDC1-202ENST00000381150 ADH1AP07327 375 aa13.02□□□□□ -0.33
SDC1-202ENST00000381150 MVDP53602 400 aa13.02□□□□□ -0.33
SDC1-202ENST00000381150 TEAD2Q15562 447 aa13.02□□□□□ -0.33
SDC1-202ENST00000381150 TRILQ7L0X0 811 aa13.02□□□□□ -0.33
SDC1-202ENST00000381150 ZFPM2Q8WW38 1151 aa13.02□□□□□ -0.33
SDC1-202ENST00000381150 SGTBQ96EQ0 304 aa13.02□□□□□ -0.33
SDC1-202ENST00000381150 ERMAPQ96PL5 475 aaPredicted RBP13.02□□□□□ -0.33
SDC1-202ENST00000381150 RBP7Q96R05 134 aa13.02□□□□□ -0.33
SDC1-202ENST00000381150 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.33
SDC1-202ENST00000381150 OR10A4Q9H209 315 aa13.02□□□□□ -0.33
SDC1-202ENST00000381150 FBXW2Q9UKT8 454 aa13.02□□□□□ -0.33
SDC1-202ENST00000381150 SERTM1A2A2V5 107 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 OR5K3A6NET4 321 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 EFCAB14O75071 495 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 TYRP14679 529 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 ACSL1P33121 698 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 ACVR1BP36896 505 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 HNMTP50135 292 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 SNRPGP62308 76 aaKnown RBP13.01□□□□□ -0.33
SDC1-202ENST00000381150 SYPL1Q16563 259 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 PLEKHS1Q5SXH7 462 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 NDUFAF5Q5TEU4 345 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 QSOX2Q6ZRP7 698 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 ZER1Q7Z7L7 766 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 LRRTM4Q86VH4 590 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 OR4D11Q8NGI4 311 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 MOSPD2Q8NHP6 518 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 LHFPL5Q8TAF8 219 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 KLK6Q92876 244 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 CXorf58Q96LI9 332 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 FAM83CQ9BQN1 747 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 GSDMCQ9BYG8 508 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 CHST8Q9H2A9 424 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 SPHK2Q9NRA0 654 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 SLC13A4Q9UKG4 626 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 CACNA1CQ13936 2221 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 ARHGEF33A8MVX0 844 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 TOR1AO14656 332 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 SMAD9O15198 467 aaKnown RBP13.01□□□□□ -0.33
SDC1-202ENST00000381150 SEMA7AO75326 666 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 SOD1P00441 154 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 SRPRAP08240 638 aaKnown RBP13.01□□□□□ -0.33
SDC1-202ENST00000381150 MRPL3P09001 348 aaKnown RBP13.01□□□□□ -0.33
SDC1-202ENST00000381150 POU3F2P20265 443 aaPredicted RBP13.01□□□□□ -0.33
SDC1-202ENST00000381150 GABRA5P31644 462 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 OPRD1P41143 372 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 GPR137Q96N19 417 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 ABHD1Q96SE0 405 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 GPA33Q99795 319 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 CXorf36Q9H7Y0 433 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 SLC35C2Q9NQQ7 365 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 SDHAF2Q9NX18 166 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 CXXC1Q9P0U4 656 aaPredicted RBP13.01□□□□□ -0.33
SDC1-202ENST00000381150 GON4LQ3T8J9 2241 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 SLC16A5O15375 505 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 POLR2LP62875 67 aaKnown RBP13.01□□□□□ -0.33
SDC1-202ENST00000381150 PUDPQ08623 228 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 CNTN1Q12860 1018 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 COL28A1Q2UY09 1125 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 SLC25A25Q6KCM7 469 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 MED27Q6P2C8 311 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 Q6ZVL8 140 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 LIX1LQ8IVB5 337 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 SIAH3Q8IW03 269 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 TDP1Q9NUW8 608 aa13.01□□□□□ -0.33
SDC1-202ENST00000381150 GLOD5A6NK44 160 aa13□□□□□ -0.33
SDC1-202ENST00000381150 CPSF4LA6NMK7 179 aaKnown RBP13□□□□□ -0.33
SDC1-202ENST00000381150 L7N2F9 121 aa13□□□□□ -0.33
SDC1-202ENST00000381150 RNASET2O00584 256 aaKnown RBP13□□□□□ -0.33
SDC1-202ENST00000381150 SLCO2B1O94956 709 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms