RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ITPKCQ96DU7 683 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ZNF597Q96LX8 424 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 COG8Q96MW5 612 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ZNF442Q9H7R0 627 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 GORASP2Q9H8Y8 452 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 PPP1R3DO95685 299 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 PLATP00750 562 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 PROS1P07225 676 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ITGB7P26010 798 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 MORN1Q5T089 497 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 UNQ6126/PRO20091Q6UXV3 157 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 DPPA4Q7L190 304 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 IL22RA1Q8N6P7 574 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ZDHHC1Q8WTX9 485 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 TMIGD2Q96BF3 282 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ACPTQ9BZG2 426 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 DPH1Q9BZG8 443 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 INTS6Q9UL03 887 aaKnown RBP15.18■□□□□ 0.02
COL2A1-202ENST00000380518 PRELID1Q9Y255 219 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ATE1O95260 518 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 HOXB9P17482 250 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-202ENST00000380518 CERS1P27544 350 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 MC3RP41968 323 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 SLC26A5P58743 744 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 FAM69BQ5VUD6 431 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 FAM205BPQ63HN1 556 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 MAFIPQ8WZ33 124 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 DPCDQ9BVM2 203 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-202ENST00000380518 PITHD1Q9GZP4 211 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-202ENST00000380518 CSNK1G1Q9HCP0 422 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ZNF226Q9NYT6 803 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 CNIH4Q9P003 139 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 MRPL15Q9P015 296 aaKnown RBP15.18■□□□□ 0.02
COL2A1-202ENST00000380518 TMPRSS11EQ9UL52 423 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ATXN7L1Q9ULK2 861 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ZNF217O75362 1048 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ARHGAP19Q14CB8 494 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ZNF100Q8IYN0 542 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 CPXM2Q8N436 756 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ALG8Q9BVK2 526 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 KLF16Q9BXK1 252 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-202ENST00000380518 CPEB1Q9BZB8 566 aaKnown RBP15.18■□□□□ 0.02
COL2A1-202ENST00000380518 ZDHHC7Q9NXF8 308 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 PHLPP1O60346 1717 aa15.18■□□□□ 0.02
COL2A1-202ENST00000380518 NPR2P20594 1047 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 HNRNPA1L2Q32P51 320 aaKnown RBP15.17■□□□□ 0.02
COL2A1-202ENST00000380518 ATAD3CQ5T2N8 411 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 SLC7A7Q9UM01 511 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 ICKQ9UPZ9 632 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 MYH8P13535 1937 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 AMY2AP04746 511 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 TRMT10AQ8TBZ6 339 aaKnown RBP15.17■□□□□ 0.02
COL2A1-202ENST00000380518 ASB4Q9Y574 426 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 A6NLC8 198 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 LYRM1O43325 122 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 CA5AP35218 305 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 ELOAQ14241 798 aaKnown RBP15.17■□□□□ 0.02
COL2A1-202ENST00000380518 DEFB110Q30KQ9 67 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 OR51L1Q8NGJ5 315 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 LRP6O75581 1613 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 A0A0U1RQS6 177 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 HMGN2P05204 90 aaKnown RBP15.17■□□□□ 0.02
COL2A1-202ENST00000380518 PNMTP11086 282 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 NR0B1P51843 470 aaKnown RBP15.17■□□□□ 0.02
COL2A1-202ENST00000380518 GARNL3Q5VVW2 1013 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 CGB2Q6NT52 195 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 GSG1LQ6UXU4 331 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 HSD11B1LQ7Z5J1 315 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 TMEM151BQ8IW70 566 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 GATA6Q92908 595 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 DDIT4LQ96D03 193 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 ATOH8Q96SQ7 321 aa15.17■□□□□ 0.02
COL2A1-202ENST00000380518 TRAV18A0A075B6X5 111 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 TCRBV3S1A0A5B6 114 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 OPRL1P41146 370 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 TRIM46Q7Z4K8 759 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 VWA5B2Q8N398 1253 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 OR9A2Q8NGT5 310 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 KLHL15Q96M94 604 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 ALOXE3Q9BYJ1 711 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 FAIMQ9NVQ4 179 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 ERVK-19Q9WJR5 959 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 P04436 131 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 PTH2RP49190 550 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 NADSYN1Q6IA69 706 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 CYB561A3Q8NBI2 242 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 C3orf58Q8NDZ4 430 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 OR6C4Q8NGE1 309 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 ENPP5Q9UJA9 477 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 MROH6A6NGR9 719 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 PRSS3P35030 304 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 TDGQ13569 410 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 KIR2DS3Q14952 304 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 ZNF619Q8N2I2 560 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 OR6Q1Q8NGQ2 317 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 TMEM239Q8WW34 195 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 PPIL3Q9H2H8 161 aaKnown RBP15.16■□□□□ 0.02
COL2A1-202ENST00000380518 CWH43Q9H720 699 aa15.16■□□□□ 0.02
COL2A1-202ENST00000380518 UBE2J1Q9Y385 318 aaPredicted RBP15.16■□□□□ 0.02
COL2A1-202ENST00000380518 USP3Q9Y6I4 520 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms