RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 LRRTM2O43300 516 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 LATO43561 262 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 CDC40O60508 579 aaKnown RBP eCLIP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 KAT7O95251 611 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 IL1AP01583 271 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 HTR3AP46098 478 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 CAP1Q01518 475 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 GK2Q14410 553 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 DUSP7Q16829 419 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ZMAT1Q5H9K5 638 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 Q6ZSR9 355 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ZNF551Q7Z340 670 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 DCUN1D3Q8IWE4 304 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 GTPBP8Q8N3Z3 284 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 SLC25A46Q96AG3 418 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ZNF416Q9BWM5 594 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 CCDC86Q9H6F5 360 aaKnown RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 EGLN3Q9H6Z9 239 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 MEPEQ9NQ76 525 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 MAN2C1Q9NTJ4 1040 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ASF1BQ9NVP2 202 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 FBXL12Q9NXK8 326 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 KCNIP3Q9Y2W7 256 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 OR1A2Q9Y585 309 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 PLXNA1Q9UIW2 1896 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ARNTLO00327 626 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 GNSP15586 552 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 DDCP20711 480 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ARRB2P32121 409 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 VAMP2P63027 116 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 IRF5Q13568 498 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ZNF805Q5CZA5 627 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 CEP68Q76N32 757 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 DOK4Q8TEW6 326 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 CNOT9Q92600 299 aaKnown RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 SAMD8Q96LT4 415 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 GPR78Q96P69 363 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ZNF700Q9H0M5 742 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 QPCTLQ9NXS2 382 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 B4GALT6Q9UBX8 382 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 OSGIN1Q9UJX0 560 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 NDRG2Q9UN36 371 aaKnown RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 WNT6Q9Y6F9 365 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 SPEGQ15772 3267 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ZNF860A6NHJ4 632 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ATP6V1G2-DDX39BF2Z307 99 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 AGPAT2O15120 278 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 CPNE6O95741 557 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 NUDT7P0C024 238 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 UGT2B10P36537 528 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 GP2P55259 537 aaKnown RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 IL13RA1P78552 427 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 PRSS58Q8IYP2 241 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 JSRP1Q96MG2 331 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 RAD9AQ99638 391 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 SLC6A16Q9GZN6 736 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 METTL17Q9H7H0 456 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 TXNL4BQ9NX01 149 aaKnown RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ABCA3Q99758 1704 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 F5H5P2 479 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 B4GALT2O60909 372 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ADAP00813 363 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ASGR2P07307 311 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 GATMP50440 423 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ART1P52961 327 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 LMAN2Q12907 356 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 TMEM205Q6UW68 189 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 OR8J2Q8NGG1 315 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 OR5AK2Q8NH90 309 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 SMPDL3AQ92484 453 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 DCUN1D4Q92564 292 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 Q9N2J8 555 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 BIN3Q9NQY0 253 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 RXFP3Q9NSD7 469 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 NDUFAF4Q9P032 175 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 PAPPAQ13219 1627 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 C1orf226A1L170 272 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 TTC34A8MYJ7 566 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 SOX1O00570 391 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 SMAD6O43541 496 aaKnown RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 CSO75390 466 aaKnown RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ADRA1AP35348 466 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 FGL2Q14314 439 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 ESCO2Q56NI9 601 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 SPRED1Q7Z699 444 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 LRRC25Q8N386 305 aaPredicted RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 OR2L8Q8NGY9 312 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 SNIP1Q8TAD8 396 aaKnown RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 METTL21AQ8WXB1 218 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 SORBS1Q9BX66 1292 aaKnown RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 PINK1Q9BXM7 581 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 DDX31Q9H8H2 851 aaKnown RBP3.97□□□□□ -1.77
BRCA2-201ENST00000380152 TMPRSS11EQ9UL52 423 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 DHDHQ9UQ10 334 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 PCDHGB2Q9Y5G2 931 aa3.97□□□□□ -1.77
BRCA2-201ENST00000380152 TCRBV5S1A1TA0A578 114 aa3.96□□□□□ -1.77
BRCA2-201ENST00000380152 NPIPB15A6NHN6 443 aaPredicted RBP3.96□□□□□ -1.77
BRCA2-201ENST00000380152 HRGP04196 525 aa3.96□□□□□ -1.77
BRCA2-201ENST00000380152 ERCC1P07992 297 aaPredicted RBP3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms