RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 CCRL2O00421 344 aa20.13■□□□□ 0.81
TRIM54-202ENST00000380075 OCM2P0CE71 109 aa20.13■□□□□ 0.81
TRIM54-202ENST00000380075 OCMP0CE72 109 aaPredicted RBP20.13■□□□□ 0.81
TRIM54-202ENST00000380075 GIPRP48546 466 aa20.13■□□□□ 0.81
TRIM54-202ENST00000380075 RUNX2Q13950 521 aa20.13■□□□□ 0.81
TRIM54-202ENST00000380075 MED22Q15528 200 aa20.13■□□□□ 0.81
TRIM54-202ENST00000380075 INAQ16352 499 aa20.13■□□□□ 0.81
TRIM54-202ENST00000380075 TCEANCQ8N8B7 351 aa20.13■□□□□ 0.81
TRIM54-202ENST00000380075 MINDY2Q8NBR6 621 aa20.13■□□□□ 0.81
TRIM54-202ENST00000380075 OR52P1PQ8NH57 321 aa20.13■□□□□ 0.81
TRIM54-202ENST00000380075 BAHD1Q8TBE0 780 aaPredicted RBP20.13■□□□□ 0.81
TRIM54-202ENST00000380075 DIO2Q92813 273 aa20.13■□□□□ 0.81
TRIM54-202ENST00000380075 DNAJC27Q9NZQ0 273 aa20.13■□□□□ 0.81
TRIM54-202ENST00000380075 MUC6Q6W4X9 2439 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 METTL15A6NJ78 407 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 MAGEB3O15480 346 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 IGFBP1P08833 259 aaPredicted RBP20.12■□□□□ 0.81
TRIM54-202ENST00000380075 CCNYL3P0C7X3 344 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 DBTP11182 482 aaKnown RBP20.12■□□□□ 0.81
TRIM54-202ENST00000380075 CPMP14384 443 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 MAOBP27338 520 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 UBE2IP63279 158 aaKnown RBP20.12■□□□□ 0.81
TRIM54-202ENST00000380075 ZNF91Q05481 1191 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 ARHGAP11BQ3KRB8 267 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 TUBA3EQ6PEY2 450 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 FAM111BQ6SJ93 734 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 RNF44Q7L0R7 432 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 VRK2Q86Y07 508 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 PRRG3Q9BZD7 231 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 NXF2Q9GZY0 626 aaKnown RBP20.12■□□□□ 0.81
TRIM54-202ENST00000380075 QRSL1Q9H0R6 528 aaKnown RBP20.12■□□□□ 0.81
TRIM54-202ENST00000380075 DSN1Q9H410 356 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 TVP23BQ9NYZ1 205 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 ZNF232Q9UNY5 417 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 A0A087WUU8 490 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 A0A0J9YY10 115 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 AP3D1O14617 1153 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 TPST2O60704 377 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 HSMCR30P0CW71 290 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 BMP4P12644 408 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 PORP16435 677 aaPredicted RBP20.12■□□□□ 0.81
TRIM54-202ENST00000380075 DHPSP49366 369 aaPredicted RBP20.12■□□□□ 0.81
TRIM54-202ENST00000380075 TSPAN31Q12999 210 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 GINS1Q14691 196 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 FRRS1Q6ZNA5 592 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 PEX5LQ8IYB4 626 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 OR13H1Q8NG92 308 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 OR5M11Q96RB7 305 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 MND1Q9BWT6 205 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 PCED1AQ9H1Q7 454 aa20.12■□□□□ 0.81
TRIM54-202ENST00000380075 IRGMA1A4Y4 181 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 SNTNA6NMZ2 147 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 SCG5P05408 212 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 PDX1P52945 283 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 EIPR1Q53HC9 387 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 C6orf132Q5T0Z8 1188 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 MRGPREQ86SM8 312 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 TEX47Q8TBZ9 253 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 COL26A1Q96A83 441 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 TAPBPLQ9BX59 468 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 TSSK6Q9BXA6 273 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 TAS2R16Q9NYV7 291 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 C19orf53Q9UNZ5 99 aaPredicted RBP20.11■□□□□ 0.81
TRIM54-202ENST00000380075 SDK1Q7Z5N4 2213 aa20.11■□□□□ 0.81
TRIM54-202ENST00000380075 A0A087WV62 115 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 H0YGG7 62 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 OR5F1O95221 314 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 CD40LGP29965 261 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 NUDT1P36639 197 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 ARF3P61204 181 aaPredicted RBP20.1■□□□□ 0.81
TRIM54-202ENST00000380075 SIM1P81133 766 aaPredicted RBP20.1■□□□□ 0.81
TRIM54-202ENST00000380075 EFNB1P98172 346 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 LARS2Q15031 903 aaKnown RBP20.1■□□□□ 0.81
TRIM54-202ENST00000380075 ZCCHC12Q6PEW1 402 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 GDPGP1Q6ZNW5 385 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 RASSF6Q6ZTQ3 369 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 RRM2BQ7LG56 351 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 HMGN2P46Q86SG4 172 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 RBM12BQ8IXT5 1001 aaKnown RBP20.1■□□□□ 0.81
TRIM54-202ENST00000380075 SLC16A11Q8NCK7 471 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 PROKR2Q8NFJ6 384 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 IRF2BPLQ9H1B7 796 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 OR51E2Q9H255 320 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 ANKRA2Q9H9E1 313 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 ZNF443Q9Y2A4 671 aaPredicted RBP20.1■□□□□ 0.81
TRIM54-202ENST00000380075 LSM2Q9Y333 95 aaKnown RBP20.1■□□□□ 0.81
TRIM54-202ENST00000380075 WDR45Q9Y484 360 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 SLCO1B1Q9Y6L6 691 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 TAF4O00268 1085 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 ATP1B1P05026 303 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 THBS1P07996 1170 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 ENDOUP21128 410 aaKnown RBP20.1■□□□□ 0.81
TRIM54-202ENST00000380075 TGFBR1P36897 503 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 RGS8P57771 180 aaPredicted RBP20.1■□□□□ 0.81
TRIM54-202ENST00000380075 DECR1Q16698 335 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 TSTQ16762 297 aaKnown RBP20.1■□□□□ 0.81
TRIM54-202ENST00000380075 ZNF628Q5EBL2 1059 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 SLC27A4Q6P1M0 643 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 ZNF730Q6ZMV8 503 aa20.1■□□□□ 0.81
TRIM54-202ENST00000380075 DGLUCYQ7Z3D6 616 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms