RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TRBV4-1A0A0J9YWV2 114 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 GMFGO60234 142 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 NOL3O60936 208 aaKnown RBP10.14□□□□□ -0.79
NEDD9-201ENST00000379433 NDUFS2O75306 463 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 CD46P15529 392 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 NUP62P37198 522 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-201ENST00000379433 XKP51811 444 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 ALDH6A1Q02252 535 aaKnown RBP10.14□□□□□ -0.79
NEDD9-201ENST00000379433 NPRL3Q12980 569 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 SNTA1Q13424 505 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 GAS6Q14393 721 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 ZMYND11Q15326 602 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 LAIR1Q6GTX8 287 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 ARMC6Q6NXE6 501 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 VN1R4Q7Z5H5 301 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 OR2L5Q8NG80 312 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 LMX1AQ8TE12 382 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 NCSTNQ92542 709 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 TRIM63Q969Q1 353 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 RERGQ96A58 199 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-201ENST00000379433 KIAA1143Q96AT1 154 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-201ENST00000379433 ISOC1Q96CN7 298 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 PAK1IP1Q9NWT1 392 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-201ENST00000379433 TAS2R16Q9NYV7 291 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 GRHPRQ9UBQ7 328 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 LYVE1Q9Y5Y7 322 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 KIAA1549LQ6ZVL6 1849 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 PNMA8CA0A1B0GUJ8 204 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 FAM170BA6NMN3 283 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 A8MU76 341 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 CENPBD1B2RD01 187 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 MASP2O00187 686 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 SLC1A7O00341 560 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 CIDEAO60543 219 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 CYP7B1O75881 506 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 ATE1O95260 518 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 TNFP01375 233 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 IGHV4-34P06331 123 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 DCNP07585 359 aaKnown RBP10.14□□□□□ -0.79
NEDD9-201ENST00000379433 PF4V1P10720 104 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 CRHBPP24387 322 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 C21orf33P30042 268 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-201ENST00000379433 MLLT10P55197 1068 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 SHC2P98077 582 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 MVKQ03426 396 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 RGS1Q08116 209 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 CDK5R2Q13319 367 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 PDE7AQ13946 482 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 VEZF1Q14119 521 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 GPR68Q15743 365 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 BROXQ5VW32 411 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 NKAIN2Q5VXU1 208 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 FBXO42Q6P3S6 717 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 ZCCHC12Q6PEW1 402 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 IDO2Q6ZQW0 420 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 C16orf62Q7Z3J2 963 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 TSEN54Q7Z6J9 526 aaKnown RBP10.14□□□□□ -0.79
NEDD9-201ENST00000379433 ASPGQ86U10 573 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 KRT73Q86Y46 540 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 CEP76Q8TAP6 659 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 OR5P2Q8WZ92 322 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 NECTIN4Q96NY8 510 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 MCCC2Q9HCC0 563 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 PRDM7Q9NQW5 492 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 SIRT3Q9NTG7 399 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-201ENST00000379433 ZNF639Q9UID6 485 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 GPR52Q9Y2T5 361 aa10.14□□□□□ -0.79
NEDD9-201ENST00000379433 DNMT3AQ9Y6K1 912 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-201ENST00000379433 FCMRO60667 390 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 ADAM11O75078 769 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 CLEC3AO75596 197 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 TGFBR1P36897 503 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 CTSKP43235 329 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 CSNK1EP49674 416 aaKnown RBP10.13□□□□□ -0.79
NEDD9-201ENST00000379433 LIM2P55344 173 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 GNG2P59768 71 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 MRPS21P82921 87 aaKnown RBP10.13□□□□□ -0.79
NEDD9-201ENST00000379433 MAT1AQ00266 395 aaKnown RBP10.13□□□□□ -0.79
NEDD9-201ENST00000379433 PUM1Q14671 1186 aaKnown RBP eCLIP10.13□□□□□ -0.79
NEDD9-201ENST00000379433 FAM111BQ6SJ93 734 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 MSANTD1Q6ZTZ1 278 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 COMTD1Q86VU5 262 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 NRROSQ86YC3 692 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 IQCF1Q8N6M8 205 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 KLHDC7BQ96G42 594 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 ZNF300Q96RE9 604 aaPredicted RBP10.13□□□□□ -0.79
NEDD9-201ENST00000379433 NODALQ96S42 347 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 MAGIXQ9H6Y5 334 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 PRDM6Q9NQX0 595 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 SLC13A4Q9UKG4 626 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 SNX7Q9UNH6 387 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 EP300Q09472 2414 aaPredicted RBP10.13□□□□□ -0.79
NEDD9-201ENST00000379433 PRAMEF27A3QJZ7 478 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 TMEM229AB2RXF0 380 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 H0YGG7 62 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 HYAL3O43820 417 aaPredicted RBP10.13□□□□□ -0.79
NEDD9-201ENST00000379433 IL9P15248 144 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 NT5EP21589 574 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 PPP2R1BP30154 601 aa10.13□□□□□ -0.79
NEDD9-201ENST00000379433 ARF3P61204 181 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms