RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TRPC4APQ8TEL6 797 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 ZNF681Q96N22 645 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 NAPGQ99747 312 aaPredicted RBP15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 LRRC1Q9BTT6 524 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 PRRG4Q9BZD6 226 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 STMN4Q9H169 189 aaPredicted RBP15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 RNF122Q9H9V4 155 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 FLRT3Q9NZU0 649 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 PCTPQ9UKL6 214 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 LAMP3Q9UQV4 416 aa15.99■□□□□ 0.15
PDLIM4-202ENST00000379018 ABCA1O95477 2261 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 SHISA8B8ZZ34 492 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 TNFRSF21O75509 655 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 AQP8O94778 261 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 PLGP00747 810 aaPredicted RBP15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 PCYT1AP49585 367 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 SERPINB8P50452 374 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 RPS3AP61247 264 aaKnown RBP15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 C2orf54Q08AI8 447 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 NAB1Q13506 487 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 CLEC12BQ2HXU8 276 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 LGSNQ5TDP6 509 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 VSTM2LQ96N03 204 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 GPR78Q96P69 363 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 NTMT1Q9BV86 223 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 RNF14Q9UBS8 474 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 ZNF175Q9Y473 711 aa15.98■□□□□ 0.15
PDLIM4-202ENST00000379018 HMX2A2RU54 273 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 OR2M5A3KFT3 312 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 FAM187AA6NFU0 413 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 PPP6CO00743 305 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 HS3ST1O14792 307 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 KLF4O43474 513 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 BCAS2O75934 225 aaPredicted RBP15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 TP53P04637 393 aaPredicted RBP15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 IL3P08700 152 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 PNLIPRP2P54317 469 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 FGFBP1Q14512 234 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 TCHHL1Q5QJ38 904 aaPredicted RBP15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 LETMD1Q6P1Q0 360 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 FAM214BQ7L5A3 538 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 CCDC91Q7Z6B0 441 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 PHC2Q8IXK0 858 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 FADS6Q8N9I5 356 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 UHMK1Q8TAS1 419 aaKnown RBP15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 ZNF675Q8TD23 568 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 AKAP1Q92667 903 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 CAVIN3Q969G5 261 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 TRIM44Q96DX7 344 aaPredicted RBP15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 MTBPQ96DY7 904 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 GIMAP4Q9NUV9 329 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 ZNF701Q9NV72 531 aaPredicted RBP15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 XPR1Q9UBH6 696 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 EMC9Q9Y3B6 208 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 CR1P17927 2039 aa15.97■□□□□ 0.15
PDLIM4-202ENST00000379018 ANK3Q12955 4377 aaKnown RBP15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 CCDC189A1A4V9 331 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 SMIM24O75264 130 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 EIF1AXP47813 144 aaKnown RBP15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 SLC6A8P48029 635 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 CDH13P55290 713 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 CTBP2P56545 445 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 MRPS22P82650 360 aaKnown RBP15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 CAPRIN1Q14444 709 aaKnown RBP15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 METTL2BQ6P1Q9 378 aaKnown RBP15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 CEP112Q8N8E3 955 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 OR7G2Q8NG99 324 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 CDC26Q8NHZ8 85 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 FBXO25Q8TCJ0 367 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 IGFBPL1Q8WX77 278 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 GFM2Q969S9 779 aaKnown RBP15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 ACTR6Q9GZN1 396 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 PTGES2Q9H7Z7 377 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 YAE1D1Q9NRH1 226 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 SNX6Q9UNH7 406 aa15.96■□□□□ 0.15
PDLIM4-202ENST00000379018 GNG14A0A1W2PPG7 69 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 EIF1AYO14602 144 aaKnown RBP15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 CLOCKO15516 846 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 OPN1LWP04000 364 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 ALDOAP04075 364 aaKnown RBP15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 CTAGE8P0CG41 777 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 FCGR2AP12318 317 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 RPS4XP62701 263 aaKnown RBP15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 TRADDQ15628 312 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 GGTA1PQ4G0N0 100 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 STAC2Q6ZMT1 411 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 SH2D5Q6ZV89 423 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 MARCH3Q86UD3 253 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 CTAGE4Q8IX94 777 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 FAM9CQ8IZT9 166 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 DUSP19Q8WTR2 217 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 GTPBP3Q969Y2 492 aaKnown RBP15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 C1GALT1C1Q96EU7 318 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 EBPLQ9BY08 206 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 RTN4RQ9BZR6 473 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 KCNF1Q9H3M0 494 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 C12orf49Q9H741 205 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 SDHAF3Q9NRP4 125 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 TAS2R9Q9NYW1 312 aa15.95■□□□□ 0.14
PDLIM4-202ENST00000379018 MXRA5Q9NR99 2828 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms