RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TSPAN9O75954 239 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 GLULP15104 373 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 HK1P19367 917 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 CA5AP35218 305 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 TUBA3CQ13748 450 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 NDUFAF6Q330K2 333 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 USP43Q70EL4 1123 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 MCEMP1Q8IX19 187 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 ARL14Q8N4G2 192 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 RHBDD1Q8TEB9 315 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 TSEN15Q8WW01 171 aaKnown RBP13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 EDAQ92838 391 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 SLC41A3Q96GZ6 507 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 FUNDC2Q9BWH2 189 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 IKZF5Q9H5V7 419 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 SLC25A37Q9NYZ2 338 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 COMMD3Q9UBI1 195 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 PEX16Q9Y5Y5 336 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 MYOFQ9NZM1 2061 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 RPP14O95059 124 aaKnown RBP13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 OSMP13725 252 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF26P17031 533 aaPredicted RBP13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 GBX2P52951 348 aaPredicted RBP13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 YBX1P67809 324 aaKnown RBP13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 TNFRSF17Q02223 184 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 UBE2UQ5VVX9 321 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 MZT2BQ6NZ67 158 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 KRT74Q7RTS7 529 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 LHFPL3Q86UP9 236 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 PIK3R3Q92569 461 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 CRB3Q9BUF7 120 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 MND1Q9BWT6 205 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 PTGES2Q9H7Z7 377 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 C1GALT1Q9NS00 363 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 CENPMQ9NSP4 180 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 ASXL3Q9C0F0 2248 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 C11orf98E9PRG8 122 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 J3KTA2 159 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 CELP19835 753 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 RCVRNP35243 200 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 PTGES3Q15185 160 aaKnown RBP13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 GPR19Q15760 415 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 PRR22Q8IZ63 422 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 MS4A6EQ96DS6 147 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 DUSP23Q9BVJ7 150 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 PINK1Q9BXM7 581 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 TTTY10Q9BZA0 68 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 LHPPQ9H008 270 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 SPNS1Q9H2V7 528 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 TBCCD1Q9NVR7 557 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 CACNA1EQ15878 2313 aa13.33□□□□□ -0.28
SHROOM1-203ENST00000378679 A0A1W2PPC4 97 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 PCDH17O14917 1159 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 CASC3O15234 703 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 CDK5R2Q13319 367 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 VRK2Q86Y07 508 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 MARCH9Q86YJ5 346 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ABHD11Q8NFV4 315 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF675Q8TD23 568 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 HS6ST2Q96MM7 605 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ASPNQ9BXN1 380 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 IRF2BPLQ9H1B7 796 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 BRD7Q9NPI1 651 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 GPR83Q9NYM4 423 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 DHCR7Q9UBM7 475 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 SLC17A4Q9Y2C5 497 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 GPR52Q9Y2T5 361 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 PCDHGB1Q9Y5G3 927 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 RIF1Q5UIP0 2472 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 UNC119BA6NIH7 251 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 OR2B6P58173 313 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 SLC3A1Q07837 685 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 LRIF1Q5T3J3 769 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 SLC48A1Q6P1K1 146 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 OLIG3Q7RTU3 272 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 FBXL6Q8N531 539 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 EID2Q8N6I1 236 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 TMEM234Q8WY98 164 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 NAT6Q93015 286 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 KCTD7Q96MP8 289 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 SECISBP2Q96T21 854 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 MGLLQ99685 303 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 POLDIP3Q9BY77 421 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF304Q9HCX3 659 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 HSPE1-MOB4S4R3N1 261 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 OR5K3A6NET4 321 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 M0R129 80 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ACOX3O15254 700 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ALPLP05186 524 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 MRPL3P09001 348 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 GPR143P51810 404 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 EMP2P54851 167 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 TIAL1Q01085 375 aaKnown RBP eCLIP13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 DCST2Q5T1A1 773 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 NKAIN2Q5VXU1 208 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF547Q8IVP9 402 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF676Q8N7Q3 588 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ADAMTS16Q8TE57 1224 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms