RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 C15orf40Q8WUR7 153 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 KHSRPQ92945 711 aaKnown RBP eCLIP10.24□□□□□ -0.77
HIF3A-205ENST00000377670 S100A16Q96FQ6 103 aaKnown RBP10.24□□□□□ -0.77
HIF3A-205ENST00000377670 CTRCQ99895 268 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 OR51I1Q9H343 314 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 NANOGQ9H9S0 305 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 CCM2LQ9NUG4 571 aaPredicted RBP10.24□□□□□ -0.77
HIF3A-205ENST00000377670 SMOXQ9NWM0 555 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 NME7Q9Y5B8 376 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 PCDHGA8Q9Y5G5 932 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 SHANK3Q9BYB0 1731 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 TRGV8A0A0C4DH27 118 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 E2F3O00716 465 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 MTHFD2P13995 350 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 DNASE1P24855 282 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 DCDP81605 110 aaKnown RBP10.24□□□□□ -0.77
HIF3A-205ENST00000377670 ZNF763Q0D2J5 394 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 ABRAXAS2Q15018 415 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 SLC36A3Q495N2 470 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 TSSK4Q6SA08 328 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 RSPO2Q6UXX9 243 aaPredicted RBP10.24□□□□□ -0.77
HIF3A-205ENST00000377670 RTP4Q96DX8 246 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 SCRN2Q96FV2 425 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 SLC45A3Q96JT2 553 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 GHRLQ9UBU3 117 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 EMC9Q9Y3B6 208 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 DOCK2Q92608 1830 aa10.24□□□□□ -0.77
HIF3A-205ENST00000377670 OR52A4PA6NMU1 304 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 C17orf105B2RV13 164 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 GPR89AB7ZAQ6 455 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 PPP6CO00743 305 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 SDHDO14521 159 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 MPPED1O15442 326 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 KIAA0513O60268 411 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 GPR89BP0CG08 455 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 ZNF16P17020 682 aaPredicted RBP10.23□□□□□ -0.77
HIF3A-205ENST00000377670 NFATC3Q12968 1075 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 SPIN3Q5JUX0 258 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 MFSD2AQ8NA29 543 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 NUP43Q8NFH3 380 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 ECHDC3Q96DC8 303 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 ATPIF1Q9UII2 106 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 PCDHB14Q9Y5E9 798 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 UBR3Q6ZT12 1888 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 A6NHS1 94 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 ARGFXA6NJG6 315 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 MSL3P1P0C860 447 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 HOXA9P31269 272 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 SFTPDP35247 375 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 RPL35P42766 123 aaKnown RBP10.23□□□□□ -0.77
HIF3A-205ENST00000377670 ATP4BP51164 291 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 CLCA4Q14CN2 919 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 STEAP4Q687X5 459 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 DPPA4Q7L190 304 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 JAGN1Q8N5M9 183 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 TMIGD2Q96BF3 282 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 PTERQ96BW5 349 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 RDH12Q96NR8 316 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 MFRPQ9BY79 579 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 ALOXE3Q9BYJ1 711 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 SH2B3Q9UQQ2 575 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 NUP205Q92621 2012 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 A0A0A6YYC8 382 aaPredicted RBP10.23□□□□□ -0.77
HIF3A-205ENST00000377670 C4orf47A7E2U8 309 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 H0YJX3 145 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 I3L1I5 382 aaPredicted RBP10.23□□□□□ -0.77
HIF3A-205ENST00000377670 TUBG1P23258 451 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 CFL1P23528 166 aaKnown RBP10.23□□□□□ -0.77
HIF3A-205ENST00000377670 HOXD12P35452 270 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 HMGCLP35914 325 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 HLCSP50747 726 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 SH3BP2P78314 561 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 CEACAM7Q14002 265 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 SEC23BQ15437 767 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 RBMS3Q6XE24 437 aaKnown RBP10.23□□□□□ -0.77
HIF3A-205ENST00000377670 PARS2Q7L3T8 475 aaKnown RBP10.23□□□□□ -0.77
HIF3A-205ENST00000377670 TMEM185BQ9H7F4 350 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 IL26Q9NPH9 171 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 MCM3APO60318 1980 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 KLRC4-KLRK1H3BQV0 150 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 B4GAT1O43505 415 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 SORBS2O94875 1100 aaKnown RBP10.23□□□□□ -0.77
HIF3A-205ENST00000377670 NR4A2P43354 598 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 NPRL3Q12980 569 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 FAM189A2Q15884 450 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 MPP7Q5T2T1 576 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 LIPJQ5W064 366 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 ASRGL1Q7L266 308 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 OR4N5Q8IXE1 308 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 ZNF565Q8N9K5 539 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 DEFB124Q8NES8 71 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 HOXD1Q9GZZ0 328 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 MMP17Q9ULZ9 603 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 PCDHGB6Q9Y5F9 930 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 EMC8O43402 210 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 PDYNP01213 254 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 ADORA3P0DMS8 318 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 PRKACBP22694 351 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 SLC6A6P31641 620 aa10.23□□□□□ -0.77
HIF3A-205ENST00000377670 XCR1P46094 333 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms