RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 OR2B2Q9GZK3 357 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 PRDM14Q9GZV8 571 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 KCNJ16Q9NPI9 418 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 ATAD3AQ9NVI7 634 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 ATP6V1HQ9UI12 483 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 DKKL1Q9UK85 242 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 CAMK2AQ9UQM7 478 aa15.33■□□□□ 0.04
HMGN4-201ENST00000377575 EIF3LQ9Y262 564 aaKnown RBP15.33■□□□□ 0.04
HMGN4-201ENST00000377575 A0A0G2JNJ9 132 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 IL33O95760 270 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 BMP7P18075 431 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 SRD5A2P31213 254 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 CLK3P49761 638 aaKnown RBP15.32■□□□□ 0.04
HMGN4-201ENST00000377575 PRR5P85299 388 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 GAB1Q13480 694 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 PTGR1Q14914 329 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 MLC1Q15049 377 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 PDCD2Q16342 344 aaPredicted RBP15.32■□□□□ 0.04
HMGN4-201ENST00000377575 ACSF3Q4G176 576 aaPredicted RBP15.32■□□□□ 0.04
HMGN4-201ENST00000377575 IL23RQ5VWK5 629 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 WDR53Q7Z5U6 358 aaPredicted RBP15.32■□□□□ 0.04
HMGN4-201ENST00000377575 YRDCQ86U90 279 aaKnown RBP15.32■□□□□ 0.04
HMGN4-201ENST00000377575 IFNEQ86WN2 208 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 LACC1Q8IV20 430 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 NATD1Q8N6N6 113 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 ZNF781Q8N8C0 355 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 CDRT4Q8N9R6 151 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 NUP43Q8NFH3 380 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 PRPF18Q99633 342 aaKnown RBP15.32■□□□□ 0.04
HMGN4-201ENST00000377575 SPOCK3Q9BQ16 436 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 UGT2B28Q9BY64 529 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 SDHAF3Q9NRP4 125 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 FAM120CQ9NX05 1096 aaKnown RBP15.32■□□□□ 0.04
HMGN4-201ENST00000377575 NTMQ9P121 344 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 PPP4R1LQ9P1A2 415 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 Q9UFV3 132 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.32■□□□□ 0.04
HMGN4-201ENST00000377575 RAP2CQ9Y3L5 183 aa15.32■□□□□ 0.04
HMGN4-201ENST00000377575 INTS1Q8N201 2190 aaKnown RBP15.32■□□□□ 0.04
HMGN4-201ENST00000377575 NKX2-6A6NCS4 301 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 EMC8O43402 210 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 ITM2AO43736 263 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 SCO2O43819 266 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 PRPS1L1P21108 318 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 GABRA3P34903 492 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 RFX3P48380 749 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 SLC1A6P48664 564 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 PRKAG1P54619 331 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 GAS1P54826 345 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 SMU1Q2TAY7 513 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 CPTPQ5TA50 214 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 CES4AQ5XG92 561 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 AAGABQ6PD74 315 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 OR7A2PQ8NGA2 310 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 OR4K17Q8NGC6 315 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 GPR151Q8TDV0 419 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 HOXB13Q92826 284 aaPredicted RBP15.31■□□□□ 0.04
HMGN4-201ENST00000377575 TAS2R10Q9NYW0 307 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 NOP53Q9NZM5 478 aaKnown RBP15.31■□□□□ 0.04
HMGN4-201ENST00000377575 FBXL2Q9UKC9 423 aa15.31■□□□□ 0.04
HMGN4-201ENST00000377575 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 HSPB2A8KAH6 182 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 EPPINO95925 133 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 PRF1P14222 555 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 BGNP21810 368 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 MSX1P28360 303 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 ADH7P40394 386 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 KIR3DL1P43629 444 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 RPL14P50914 215 aaKnown RBP15.3■□□□□ 0.04
HMGN4-201ENST00000377575 RCAN2Q14206 197 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 GANABQ14697 944 aaKnown RBP15.3■□□□□ 0.04
HMGN4-201ENST00000377575 HSPB2Q16082 182 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 SLC25A35Q3KQZ1 300 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 DCST1Q5T197 706 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 HHATQ5VTY9 493 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 ZCCHC12Q6PEW1 402 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 ENPP6Q6UWR7 440 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 MEX3BQ6ZN04 569 aaKnown RBP15.3■□□□□ 0.04
HMGN4-201ENST00000377575 SLC9A6Q92581 669 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 GIMAP5Q96F15 307 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 RMND5BQ96G75 393 aaPredicted RBP15.3■□□□□ 0.04
HMGN4-201ENST00000377575 PAIP2Q9BPZ3 127 aaKnown RBP15.3■□□□□ 0.04
HMGN4-201ENST00000377575 UCK2Q9BZX2 261 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 ENKD1Q9H0I2 346 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 NEUROD4Q9HD90 331 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 ASIC5Q9NY37 505 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 MRPS18CQ9Y3D5 142 aaKnown RBP15.3■□□□□ 0.04
HMGN4-201ENST00000377575 ABCA12Q86UK0 2595 aa15.3■□□□□ 0.04
HMGN4-201ENST00000377575 DOCK7Q96N67 2140 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 APCP25054 2843 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 A0A1W2PRB8 838 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 TOXO94900 526 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 NKX2-2O95096 273 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 LAMP1P11279 417 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 EFNA1P20827 205 aaPredicted RBP15.29■□□□□ 0.04
HMGN4-201ENST00000377575 DPP4P27487 766 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 TIMP3P35625 211 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 PRIM2P49643 509 aa15.29■□□□□ 0.04
HMGN4-201ENST00000377575 DSCR4P56555 118 aaPredicted RBP15.29■□□□□ 0.04
HMGN4-201ENST00000377575 EMX2Q04743 252 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms