RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 AHRP35869 848 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 GGT2P36268 569 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 MAGEA12P43365 314 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 TNFRSF4P43489 277 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 LEG1Q6P5S2 330 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 ZNF619Q8N2I2 560 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 LILRA3Q8N6C8 439 aaPredicted RBP12.85□□□□□ -0.35
C9orf47-203ENST00000375851 CPNE2Q96FN4 548 aaPredicted RBP12.85□□□□□ -0.35
C9orf47-203ENST00000375851 CCDC115Q96NT0 180 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 CSNK1G3Q9Y6M4 447 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 NUMBLQ9Y6R0 609 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 M0R129 80 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 GKN3PP0CG01 181 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 STOMP27105 288 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 RBM34P42696 430 aaKnown RBP12.85□□□□□ -0.35
C9orf47-203ENST00000375851 PER3P56645 1201 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 CCINQ13939 588 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 CARD17Q5XLA6 110 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 FRMPD2BQ6IN97 320 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 UBTD2Q8WUN7 234 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 CDS1Q92903 461 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.85□□□□□ -0.35
C9orf47-203ENST00000375851 ACSS1Q9NUB1 689 aaPredicted RBP12.85□□□□□ -0.35
C9orf47-203ENST00000375851 SCP2D1Q9UJQ7 156 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 ERVK-19Q9WJR5 959 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 EEF1E1O43324 174 aaKnown RBP12.85□□□□□ -0.35
C9orf47-203ENST00000375851 ATP6V1G1O75348 118 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 PPP1R3DO95685 299 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 NUDT1P36639 197 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 CD97P48960 835 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 TMEM31Q5JXX7 168 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 TRIM46Q7Z4K8 759 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 FAM217AQ8IXS0 508 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 OR8H3Q8N146 312 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 CCDC54Q8NEL0 328 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 OR8J2Q8NGG1 315 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 TMEM239Q8WW34 195 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 NXPE2Q96DL1 559 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 TPD52L2O43399 206 aaKnown RBP12.85□□□□□ -0.35
C9orf47-203ENST00000375851 BCAS1O75363 584 aaPredicted RBP12.85□□□□□ -0.35
C9orf47-203ENST00000375851 MAOBP27338 520 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 DPP6P42658 865 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 MAZP56270 477 aaKnown RBP12.85□□□□□ -0.35
C9orf47-203ENST00000375851 PRKCDQ05655 676 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 MEX3DQ86XN8 651 aaKnown RBP12.85□□□□□ -0.35
C9orf47-203ENST00000375851 BMFQ96LC9 184 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 PRRC1Q96M27 445 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 METTL8Q9H825 291 aaKnown RBP12.85□□□□□ -0.35
C9orf47-203ENST00000375851 TMEM165Q9HC07 324 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 DHDHQ9UQ10 334 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 PADI2Q9Y2J8 665 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 NOP16Q9Y3C1 178 aaKnown RBP12.85□□□□□ -0.35
C9orf47-203ENST00000375851 USP54Q70EL1 1684 aa12.85□□□□□ -0.35
C9orf47-203ENST00000375851 SIPA1L3O60292 1781 aaPredicted RBP12.84□□□□□ -0.35
C9orf47-203ENST00000375851 LAMB1P07942 1786 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 ISPDA4D126 451 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 RBBP9O75884 186 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 ZDHHC11BP0C7U3 371 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 MTHFD2P13995 350 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 CD38P28907 300 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 HOXA9P31269 272 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 ZNF84P51523 738 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 ELOAQ14241 798 aaKnown RBP12.84□□□□□ -0.35
C9orf47-203ENST00000375851 FUNDC1Q8IVP5 155 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 UBQLNLQ8IYU4 475 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 SPARTQ8N0X7 666 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 HORMAD2Q8N7B1 307 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 INO80EQ8NBZ0 244 aaPredicted RBP12.84□□□□□ -0.35
C9orf47-203ENST00000375851 ABHD11Q8NFV4 315 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 GPR78Q96P69 363 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 POLE3Q9NRF9 147 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 USP36Q9P275 1121 aaKnown RBP12.84□□□□□ -0.35
C9orf47-203ENST00000375851 INTS6Q9UL03 887 aaKnown RBP12.84□□□□□ -0.35
C9orf47-203ENST00000375851 ATXN7L1Q9ULK2 861 aaPredicted RBP12.84□□□□□ -0.35
C9orf47-203ENST00000375851 FXYD6-FXYD2A0A087WZ82 144 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 SH3PXD2BA1X283 911 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 GSTT2P0CG29 244 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 ARAFP10398 606 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 CXCL12P48061 93 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 PLP2Q04941 152 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 EXOSC7Q15024 291 aaKnown RBP12.84□□□□□ -0.35
C9orf47-203ENST00000375851 LRIF1Q5T3J3 769 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 CCNJQ5T5M9 372 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 OR2L8Q8NGY9 312 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 FCAMRQ8WWV6 532 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 LINC01599Q8WXQ3 324 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 MAELQ96JY0 434 aaKnown RBP12.84□□□□□ -0.35
C9orf47-203ENST00000375851 FXYD6Q9H0Q3 95 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 ERVK13-1Q9NX77 482 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 GPR75O95800 540 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 IFNA21P01568 189 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 CLUP10909 449 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 MYOGP15173 224 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 MAP2K3P46734 347 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 RIDAP52758 137 aaKnown RBP12.84□□□□□ -0.35
C9orf47-203ENST00000375851 GK3PQ14409 553 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 PLAG1Q6DJT9 500 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 TLDC1Q6P9B6 456 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 ZER1Q7Z7L7 766 aa12.84□□□□□ -0.35
C9orf47-203ENST00000375851 ACOT11Q8WXI4 607 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms