RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 HSPB6O14558 160 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 NCCRP1Q6ZVX7 275 aaPredicted RBP12.99□□□□□ -0.33
COL4A1-201ENST00000375820 TECPR1Q7Z6L1 1165 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 BBS1Q8NFJ9 593 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 SLC2A12Q8TD20 617 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 LIN37Q96GY3 246 aaPredicted RBP12.99□□□□□ -0.33
COL4A1-201ENST00000375820 ACTR6Q9GZN1 396 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 LINC00597Q9H2U6 94 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 ZNF160Q9HCG1 818 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 TMEM131LA2VDJ0 1609 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 ZNF705FA8MVS1 300 aaPredicted RBP12.99□□□□□ -0.33
COL4A1-201ENST00000375820 SSX4O60224 188 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 PIP5K1CO60331 668 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 ZNF705DP0CH99 300 aaPredicted RBP12.99□□□□□ -0.33
COL4A1-201ENST00000375820 ZNF705BP0CI00 300 aaPredicted RBP12.99□□□□□ -0.33
COL4A1-201ENST00000375820 COMMD6Q7Z4G1 85 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 LMNTD1Q8N9Z9 388 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 LRRC15Q8TF66 581 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 ZNF775Q96BV0 537 aaPredicted RBP12.99□□□□□ -0.33
COL4A1-201ENST00000375820 SLC45A3Q96JT2 553 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 CACNG6Q9BXT2 260 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 GNG13Q9P2W3 67 aa12.99□□□□□ -0.33
COL4A1-201ENST00000375820 SLX4IPQ5VYV7 408 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 KIAA0895LQ68EN5 471 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 MAMDC2Q7Z304 686 aaPredicted RBP12.98□□□□□ -0.33
COL4A1-201ENST00000375820 NMNAT1Q9HAN9 279 aaPredicted RBP12.98□□□□□ -0.33
COL4A1-201ENST00000375820 PLEKHJ1Q9NW61 149 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 RETP07949 1114 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 CHRNEQ04844 493 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 POU4F2Q12837 409 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 FADDQ13158 208 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 OR1S1Q8NH92 325 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 NUDT22Q9BRQ3 303 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 ALOXE3Q9BYJ1 711 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 HCFC1R1Q9NWW0 138 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 FTCDNL1E5RQL4 147 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 F8W036 122 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 SEMA4FO95754 770 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 CX3CR1P49238 355 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 EPHA4P54764 986 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 BLOC1S1P78537 153 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 RPL13AP3Q6NVV1 102 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 VHLLQ6RSH7 139 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 KCTD20Q7Z5Y7 419 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 ARHGAP12Q8IWW6 846 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 RNF175Q8N4F7 328 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 SLC15A4Q8N697 577 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 METTL25Q8N6Q8 603 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 SLC17A9Q9BYT1 436 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 GPATCH2Q9NW75 528 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 TMEM14AQ9Y6G1 99 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 SLIT2O94813 1529 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 MRC1P22897 1456 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 A0A0G2JMP0 313 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 LILRB3O75022 631 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 SERPINA5P05154 406 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 RUNX3Q13761 415 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 ZNF529Q6P280 563 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 BLOC1S3Q6QNY0 202 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 CNEP1R1Q8N9A8 125 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 OR4M2Q8NGB6 313 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 OR8J1Q8NGP2 316 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 LIPT1Q9Y234 373 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.98□□□□□ -0.33
COL4A1-201ENST00000375820 C17orf105B2RV13 164 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 NUPL2O15504 423 aaKnown RBP12.98□□□□□ -0.33
COL4A1-201ENST00000375820 RDH16O75452 317 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 ERP29P30040 261 aaKnown RBP12.98□□□□□ -0.33
COL4A1-201ENST00000375820 XCR1P46094 333 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 GTPBP8Q8N3Z3 284 aaPredicted RBP12.98□□□□□ -0.33
COL4A1-201ENST00000375820 ZNF808Q8N4W9 903 aaPredicted RBP12.98□□□□□ -0.33
COL4A1-201ENST00000375820 SNED1Q8TER0 1413 aa12.98□□□□□ -0.33
COL4A1-201ENST00000375820 HTRA3P83110 453 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 SLC35G1Q2M3R5 365 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 BEX5Q5H9J7 111 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 TMEM150AQ86TG1 271 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 KBTBD6Q86V97 674 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 SNIP1Q8TAD8 396 aaKnown RBP12.97□□□□□ -0.33
COL4A1-201ENST00000375820 ABRACLQ9P1F3 81 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 ANKMY1Q9P2S6 941 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 WDR37Q9Y2I8 494 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 DNAJC15Q9Y5T4 150 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 GPR32O75388 356 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 ARSAP15289 507 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 CD79BP40259 229 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 PPP5CP53041 499 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 EEF1A1P68104 462 aaKnown RBP12.97□□□□□ -0.33
COL4A1-201ENST00000375820 LRRC18Q8N456 261 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 OR4K5Q8NGD3 323 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 HS6ST2Q96MM7 605 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 ADAMTS10Q9H324 1103 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 DNAJB11Q9UBS4 358 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 H3BUI4 141 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 ACOT7O00154 380 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 APLNRP35414 380 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 SPINT3P49223 89 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 FOXA1P55317 472 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 RAB5BP61020 215 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 ARG2P78540 354 aa12.97□□□□□ -0.33
COL4A1-201ENST00000375820 BDH1Q02338 343 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms