RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TRIQKQ629K1 86 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 MARCH9Q86YJ5 346 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 Q8N402 240 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 OR52E1Q8NGJ3 308 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 LILRB4Q8NHJ6 448 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 ACOT11Q8WXI4 607 aaPredicted RBP13.63□□□□□ -0.23
MSH5-201ENST00000375703 SMG7Q92540 1137 aaKnown RBP13.63□□□□□ -0.23
MSH5-201ENST00000375703 PAWRQ96IZ0 340 aaKnown RBP13.63□□□□□ -0.23
MSH5-201ENST00000375703 TMEM246Q9BRR3 403 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 RAB11FIP5Q9BXF6 653 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 ANKRD19PQ9H560 264 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 WDR70Q9NW82 654 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 PAQR5Q9NXK6 330 aaPredicted RBP13.63□□□□□ -0.23
MSH5-201ENST00000375703 IL20Q9NYY1 176 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 H2AFY2Q9P0M6 372 aaPredicted RBP13.63□□□□□ -0.23
MSH5-201ENST00000375703 MALT1Q9UDY8 824 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 MOSPD1Q9UJG1 213 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 NOX1Q9Y5S8 564 aa13.63□□□□□ -0.23
MSH5-201ENST00000375703 AHRP35869 848 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 GPR4P46093 362 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 RGS8P57771 180 aaPredicted RBP13.62□□□□□ -0.23
MSH5-201ENST00000375703 ZNF155Q12901 538 aaPredicted RBP13.62□□□□□ -0.23
MSH5-201ENST00000375703 CAMK1Q14012 370 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 DECR1Q16698 335 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 PLET1Q6UQ28 207 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 PLEKHM3Q6ZWE6 761 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 NOXA1Q86UR1 476 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 KLHL36Q8N4N3 616 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 FBXL6Q8N531 539 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 SRFBP1Q8NEF9 429 aaKnown RBP13.62□□□□□ -0.23
MSH5-201ENST00000375703 FYTTD1Q96QD9 318 aaKnown RBP13.62□□□□□ -0.23
MSH5-201ENST00000375703 DCLRE1CQ96SD1 692 aaKnown RBP13.62□□□□□ -0.23
MSH5-201ENST00000375703 MCHR1Q99705 422 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 ATF6BQ99941 703 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 BEX2Q9BXY8 128 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 PPP1R3EQ9H7J1 279 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 IL20RAQ9UHF4 553 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 PTPRSQ13332 1948 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 HEATR5BQ9P2D3 2071 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 CHST10O43529 356 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 AKAP8O43823 692 aaKnown RBP13.62□□□□□ -0.23
MSH5-201ENST00000375703 HCN1O60741 890 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 NCR1O76036 304 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 FPR3P25089 353 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 WASP42768 502 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 COL9A2Q14055 689 aaPredicted RBP13.62□□□□□ -0.23
MSH5-201ENST00000375703 LRRC32Q14392 662 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 IRF4Q15306 451 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 TMEM44Q2T9K0 475 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 NRMQ8IXM6 262 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 ARIH2OSQ8N7S6 290 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 OR2L3Q8NG85 312 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 NEIL3Q8TAT5 605 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 ADAMTS15Q8TE58 950 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 SPRYD4Q8WW59 207 aaPredicted RBP13.62□□□□□ -0.23
MSH5-201ENST00000375703 SLC35A4Q96G79 324 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 ZNF681Q96N22 645 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 COQ7Q99807 217 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 SOSTQ9BQB4 213 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 ACTRT3Q9BYD9 372 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 BTBD1Q9H0C5 482 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 POLMQ9NP87 494 aaPredicted RBP13.62□□□□□ -0.23
MSH5-201ENST00000375703 PHPT1Q9NRX4 125 aaPredicted RBP13.62□□□□□ -0.23
MSH5-201ENST00000375703 THAP10Q9P2Z0 257 aaPredicted RBP13.62□□□□□ -0.23
MSH5-201ENST00000375703 PRKAG2Q9UGJ0 569 aa13.62□□□□□ -0.23
MSH5-201ENST00000375703 EXOGQ9Y2C4 368 aaKnown RBP13.62□□□□□ -0.23
MSH5-201ENST00000375703 GABRPO00591 440 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 PRICKLE3O43900 615 aaPredicted RBP13.61□□□□□ -0.23
MSH5-201ENST00000375703 PRKAR1BP31321 381 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 EVX1P49640 407 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 ABATP80404 500 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 CD83Q01151 205 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 IL18Q14116 193 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 P2RY14Q15391 338 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 ZNF791Q3KP31 576 aaPredicted RBP13.61□□□□□ -0.23
MSH5-201ENST00000375703 C6orf132Q5T0Z8 1188 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 AGBL4Q5VU57 503 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 NANOGNBQ7Z5D8 188 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 SPRED2Q7Z698 418 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 BBS1Q8NFJ9 593 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 SLC41A3Q96GZ6 507 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 SECISBP2Q96T21 854 aaKnown RBP13.61□□□□□ -0.23
MSH5-201ENST00000375703 TRIM45Q9H8W5 580 aaPredicted RBP13.61□□□□□ -0.23
MSH5-201ENST00000375703 APOBEC3BQ9UH17 382 aaKnown RBP13.61□□□□□ -0.23
MSH5-201ENST00000375703 PCDHGB7Q9Y5F8 929 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 CSNK1G3Q9Y6M4 447 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 MYO10Q9HD67 2058 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 NUMA1Q14980 2115 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 A0A0B4J293 547 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 CENPBD1B2RD01 187 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 SLC2A10O95528 541 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 YES1P07947 543 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 CPN2P22792 545 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 MAP2K3P46734 347 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 PDX1P52945 283 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 BTN3A2P78410 334 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 INSL4Q14641 139 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 LTB4RQ15722 352 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 MZT2BQ6NZ67 158 aa13.61□□□□□ -0.23
MSH5-201ENST00000375703 MZT2AQ6P582 158 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms