RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 KIF13AQ9H1H9 1805 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 TET1Q8NFU7 2136 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 LNP1A1A4G5 178 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CD300LBA8K4G0 201 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CTSLP07711 333 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 RNASE1P07998 156 aaKnown RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 ENPP1P22413 925 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 TGM1P22735 817 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 IVDP26440 423 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 SCNN1GP51170 649 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 TCL1AP56279 114 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 PCBD1P61457 104 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CDK18Q07002 472 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF266Q14584 549 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 RBMS2Q15434 407 aaKnown RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 NAB2Q15742 525 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 DECR1Q16698 335 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CLLU1Q5K131 121 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF546Q86UE3 836 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 GPX8Q8TED1 209 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 KCNA7Q96RP8 456 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 UBL7Q96S82 380 aaPredicted RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 BOKQ9UMX3 212 aaPredicted RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 PIKFYVEQ9Y2I7 2098 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 NCAPD2Q15021 1401 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CUL7Q14999 1698 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 A0A1W2PRV1 198 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 DUXAA6NLW8 204 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 P2RX6O15547 441 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 SCO2O43819 266 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CSTAP01040 98 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 HIST1H1CP16403 213 aaKnown RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 AMD1P17707 334 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 DUTP33316 252 aaKnown RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 PRRX1P54821 245 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 DLX1P56177 255 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CDH17Q12864 832 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 POU4F3Q15319 338 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 BTNL3Q6UXE8 466 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 DGAT2L6Q6ZPD8 337 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 GID4Q8IVV7 300 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 STEAP2Q8NFT2 490 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 FAHD2AQ96GK7 314 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 SLC35E1Q96K37 410 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 METTL9Q9H1A3 318 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 GPN2Q9H9Y4 310 aaPredicted RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 BARX1Q9HBU1 254 aaPredicted RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 MRPS30Q9NP92 439 aaKnown RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF302Q9NR11 478 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 POLLQ9UGP5 575 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 PLAGL2Q9UPG8 496 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 JAG2Q9Y219 1238 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 RFX7Q2KHR2 1363 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 A0A1W2PPL8 197 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CLEC3AO75596 197 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 ADRB1P08588 477 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 DLDP09622 509 aaKnown RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 HNRNPA1P09651 372 aaKnown RBP eCLIP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CYP2F1P24903 491 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 ARNTP27540 789 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CCKBRP32239 447 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 PCGF2P35227 344 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 RTP1P59025 263 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 RAP1BP61224 184 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM62Q0P6H9 643 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 HNRNPA1L2Q32P51 320 aaKnown RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 UNC50Q53HI1 259 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 GPR153Q6NV75 609 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF410Q86VK4 478 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 ADGRG3Q86Y34 549 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 OR5M3Q8NGP4 307 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 OR2G3Q8NGZ4 309 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 SETD7Q8WTS6 366 aaKnown RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 MFSD14AQ96MC6 490 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CASD1Q96PB1 797 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CGREF1Q99674 301 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CPPED1Q9BRF8 314 aaPredicted RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM109Q9BVC6 243 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 PARD6GQ9BYG4 376 aaPredicted RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 NIP7Q9Y221 180 aaKnown RBP eCLIP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 NUBP2Q9Y5Y2 271 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 GLOD5A6NK44 160 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 TNFSF11O14788 317 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 RHBDL1O75783 438 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 TRBC1P01850 177 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 SPI1P17947 270 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 APEX1P27695 318 aaKnown RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 GPR3P46089 330 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 RFX5P48382 616 aaPredicted RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 ST3GAL1Q11201 340 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 RAET1LQ5VY80 246 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CCBE1Q6UXH8 406 aaPredicted RBP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CDH26Q8IXH8 852 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 CERS5Q8N5B7 392 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 HUS1BQ8NHY5 278 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 KCNJ9Q92806 393 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 GPKOWQ92917 476 aaPredicted RBP eCLIP5.68□□□□□ -1.5
SCN2A-202ENST00000375427 TNFRSF14Q92956 283 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 PRRT1Q99946 306 aa5.68□□□□□ -1.5
SCN2A-202ENST00000375427 NAA11Q9BSU3 229 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms