RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 UCN3Q969E3 161 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 MARC2Q969Z3 335 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 RERGQ96A58 199 aaPredicted RBP7.71□□□□□ -1.17
UBR4-202ENST00000375224 OR2A14Q96R47 310 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 GAL3ST1Q99999 423 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 MACROD1Q9BQ69 325 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 TTYH2Q9BSA4 534 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 PINK1Q9BXM7 581 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 SAV1Q9H4B6 383 aaPredicted RBP7.71□□□□□ -1.17
UBR4-202ENST00000375224 NMNAT1Q9HAN9 279 aaPredicted RBP7.71□□□□□ -1.17
UBR4-202ENST00000375224 CD93Q9NPY3 652 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 MTCH2Q9Y6C9 303 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 LAMA3Q16787 3333 aa7.71□□□□□ -1.17
UBR4-202ENST00000375224 SNRNP200O75643 2136 aaKnown RBP7.71□□□□□ -1.18
UBR4-202ENST00000375224 GSAPA4D1B5 854 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 C4orf51C9J302 202 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 GNB5O14775 395 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 ST8SIA5O15466 376 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 WBP4O75554 376 aaKnown RBP7.71□□□□□ -1.18
UBR4-202ENST00000375224 ECDO95905 644 aaPredicted RBP7.71□□□□□ -1.18
UBR4-202ENST00000375224 HMGN2P05204 90 aaKnown RBP7.71□□□□□ -1.18
UBR4-202ENST00000375224 HOXB3P14651 431 aaPredicted RBP7.71□□□□□ -1.18
UBR4-202ENST00000375224 CPN2P22792 545 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 BLKP51451 505 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 TNFRSF17Q02223 184 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 PIGFQ07326 219 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 GALEQ14376 348 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 ZMYND11Q15326 602 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 C18orf63Q68DL7 685 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 NUP43Q8NFH3 380 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 OR9Q2Q8NGE9 314 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 CCL4L1Q8NHW4 92 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 MNTQ99583 582 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 NIPSNAP1Q9BPW8 284 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 FUNDC2Q9BWH2 189 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 NAA50Q9GZZ1 169 aaKnown RBP7.71□□□□□ -1.18
UBR4-202ENST00000375224 CACYBPQ9HB71 228 aaKnown RBP7.71□□□□□ -1.18
UBR4-202ENST00000375224 SDHAF3Q9NRP4 125 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 GLTPQ9NZD2 209 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 MBD2Q9UBB5 411 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 SLC13A4Q9UKG4 626 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 DUSP12Q9UNI6 340 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 KLHL20Q9Y2M5 609 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 TRBV23OR9-2A0A075B6M9 112 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 OR6C74A6NCV1 312 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 C10orf142B7Z368 130 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 NDUFA2O43678 99 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 UGT2B17O75795 530 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 RECKO95980 971 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 MT-ND2P03891 347 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 ZNF888P0CJ79 500 aaPredicted RBP7.71□□□□□ -1.18
UBR4-202ENST00000375224 SMIM10L1P0DMW3 83 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 FEN1P39748 380 aaKnown RBP7.71□□□□□ -1.18
UBR4-202ENST00000375224 IDH2P48735 452 aaKnown RBP7.71□□□□□ -1.18
UBR4-202ENST00000375224 CRISP1P54107 249 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 UGT2B15P54855 530 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 LIM2P55344 173 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 CDC20Q12834 499 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 GPR18Q14330 331 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 LASP1Q14847 261 aaKnown RBP7.71□□□□□ -1.18
UBR4-202ENST00000375224 ZNF124Q15973 351 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 NDUFA9Q16795 377 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 GPAT3Q53EU6 434 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 ATAD3CQ5T2N8 411 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 TCTN3Q6NUS6 607 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 DEF8Q6ZN54 512 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 C16orf62Q7Z3J2 963 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 CCDC71Q8IV32 467 aaPredicted RBP7.71□□□□□ -1.18
UBR4-202ENST00000375224 OR4K14Q8NGD5 310 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 FLVCR1-AS1Q8TAF5 88 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 ST8SIA2Q92186 375 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 TP53INP1Q96A56 240 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 ELP4Q96EB1 424 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 SMIM10Q96HG1 83 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 ZNF681Q96N22 645 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 OR2A5Q96R48 311 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 ZFYVE21Q9BQ24 234 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 COPS4Q9BT78 406 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 ACTRT3Q9BYD9 372 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 UCK2Q9BZX2 261 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 RLIMQ9NVW2 624 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 CACNG2Q9Y698 323 aa7.71□□□□□ -1.18
UBR4-202ENST00000375224 CEP290O15078 2479 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 SYT5O00445 386 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 SLITRK5O94991 958 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 INMTO95050 263 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 CLEC2LP0C7M8 214 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 OSMP13725 252 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 POU3F3P20264 500 aaPredicted RBP7.7□□□□□ -1.18
UBR4-202ENST00000375224 MAGP20916 626 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 RPL35P42766 123 aaKnown RBP7.7□□□□□ -1.18
UBR4-202ENST00000375224 GP2P55259 537 aaKnown RBP7.7□□□□□ -1.18
UBR4-202ENST00000375224 GPR19Q15760 415 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 FRMPD2BQ6IN97 320 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 TMEM107Q6UX40 140 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 TMPRSS9Q7Z410 1059 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 HDDC2Q7Z4H3 204 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 CDH26Q8IXH8 852 aa7.7□□□□□ -1.18
UBR4-202ENST00000375224 LRRC25Q8N386 305 aaPredicted RBP7.7□□□□□ -1.18
UBR4-202ENST00000375224 KCT2Q8NC54 265 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms