RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CPTPQ5TA50 214 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 ZNF691Q5VV52 312 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 OR2T5Q6IEZ7 315 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 CAPN13Q6MZZ7 669 aaPredicted RBP4.51□□□□□ -1.69
USP48-202ENST00000374730 MED27Q6P2C8 311 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 PSRC1Q6PGN9 363 aaPredicted RBP4.51□□□□□ -1.69
USP48-202ENST00000374730 DOK6Q6PKX4 331 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 TMEM220Q6QAJ8 160 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 SPESP1Q6UW49 350 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 UNC5DQ6UXZ4 953 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 TMEM26Q6ZUK4 368 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 EIF3MQ7L2H7 374 aaKnown RBP4.51□□□□□ -1.69
USP48-202ENST00000374730 TMEM179BQ7Z7N9 219 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 RBM23Q86U06 439 aaKnown RBP4.51□□□□□ -1.69
USP48-202ENST00000374730 ANKRD46Q86W74 232 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 PTOV1Q86YD1 416 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 ZDHHC21Q8IVQ6 265 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 LAS2Q8IYD9 372 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 OR8H2Q8N162 312 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 SDR16C5Q8N3Y7 309 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 C12orf76Q8N812 135 aaPredicted RBP4.51□□□□□ -1.69
USP48-202ENST00000374730 ARL10Q8N8L6 244 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 SETD9Q8NE22 299 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 VN1R2Q8NFZ6 395 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 OR7G3Q8NG95 312 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 OR7A2PQ8NGA2 310 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 OR2T29Q8NH02 315 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 GOT1L1Q8NHS2 421 aaPredicted RBP4.51□□□□□ -1.69
USP48-202ENST00000374730 PHOSPHO2Q8TCD6 241 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 ZFP90Q8TF47 636 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 SORCS1Q8WY21 1168 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 ZNF707Q96C28 371 aaPredicted RBP4.51□□□□□ -1.69
USP48-202ENST00000374730 NUS1Q96E22 293 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 ZNF514Q96K75 400 aaPredicted RBP4.51□□□□□ -1.69
USP48-202ENST00000374730 EGLN2Q96KS0 407 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 HS6ST2Q96MM7 605 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 COG8Q96MW5 612 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 PANX1Q96RD7 426 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 BCL7BQ9BQE9 202 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 EFCAB11Q9BUY7 163 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 EBPLQ9BY08 206 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 DPEP2Q9H4A9 486 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 CXorf21Q9HAI6 301 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 TPT1P8Q9HAU6 139 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 SGK2Q9HBY8 427 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 IL1RAPQ9NPH3 570 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 ZNF282Q9UDV7 671 aaPredicted RBP4.51□□□□□ -1.69
USP48-202ENST00000374730 ATP6V1HQ9UI12 483 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 UTS2RQ9UKP6 389 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 CDC14AQ9UNH5 594 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 PCDHGB1Q9Y5G3 927 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 ORC6Q9Y5N6 252 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 MAGED1Q9Y5V3 778 aaPredicted RBP4.51□□□□□ -1.69
USP48-202ENST00000374730 KCNE2Q9Y6J6 123 aa4.51□□□□□ -1.69
USP48-202ENST00000374730 SZT2Q5T011 3432 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 DOCK8Q8NF50 2099 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 MYO10Q9HD67 2058 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 PLXND1Q9Y4D7 1925 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 TRPM6Q9BX84 2022 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 CCDC88CQ9P219 2028 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 KRT87PA6NCN2 255 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 MGAT4DA6NG13 374 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 E9PQ18 207 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 M0QX08 132 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 SLC1A7O00341 560 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 KPNA3O00505 521 aaPredicted RBP4.5□□□□□ -1.69
USP48-202ENST00000374730 BCKDKO14874 412 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 VEGFDO43915 354 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 PCDH7O60245 1069 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 MRPS14O60783 128 aaKnown RBP4.5□□□□□ -1.69
USP48-202ENST00000374730 CNOT3O75175 753 aaKnown RBP4.5□□□□□ -1.69
USP48-202ENST00000374730 UGT2B11O75310 529 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 SEMA3DO95025 777 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 ETHE1O95571 254 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 NTN1O95631 604 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 CPSF4O95639 269 aaKnown RBP4.5□□□□□ -1.69
USP48-202ENST00000374730 NFATC1O95644 943 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 ZNF682O95780 498 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 C9P02748 559 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 ITGA5P08648 1049 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 HTR1AP08908 422 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 ANXA4P09525 319 aaPredicted RBP4.5□□□□□ -1.69
USP48-202ENST00000374730 LAMP1P11279 417 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 ERGP11308 486 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 IL7RP16871 459 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 ITIH1P19827 911 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 BTF3P20290 206 aaKnown RBP4.5□□□□□ -1.69
USP48-202ENST00000374730 IGFBP5P24593 272 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 ELK4P28324 431 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 ARHGDIAP52565 204 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 FOXG1P55316 489 aaPredicted RBP4.5□□□□□ -1.69
USP48-202ENST00000374730 RPS13P62277 151 aaKnown RBP4.5□□□□□ -1.69
USP48-202ENST00000374730 NTHL1P78549 312 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 RBBP4Q09028 425 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 ZNF763Q0D2J5 394 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 FCHO2Q0JRZ9 810 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 RPA4Q13156 261 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 GAB1Q13480 694 aa4.5□□□□□ -1.69
USP48-202ENST00000374730 DDX39BQ13838 428 aaKnown RBP4.5□□□□□ -1.69
USP48-202ENST00000374730 ELAVL3Q14576 367 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms