RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 CNIH4Q9P003 139 aa13.8□□□□□ -0.2
HSPG2-201ENST00000374673 CNOT11Q9UKZ1 510 aaKnown RBP13.8□□□□□ -0.2
HSPG2-201ENST00000374673 KCNE3Q9Y6H6 103 aa13.8□□□□□ -0.2
HSPG2-201ENST00000374673 ANKRD33BA6NCL7 494 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 NDUFAB1O14561 156 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 MRASO14807 208 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 UNC5CO95185 931 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 NPPAP01160 153 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 IGKV1D-16P01601 117 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 P04436 131 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 OR12D1P0DN82 309 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 COX4I1P13073 169 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 CYP4B1P13584 511 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 PPIBP23284 216 aaKnown RBP13.79□□□□□ -0.2
HSPG2-201ENST00000374673 LCN1P31025 176 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 CASP9P55211 416 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 FADDQ13158 208 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 TRMT5Q32P41 509 aaKnown RBP13.79□□□□□ -0.2
HSPG2-201ENST00000374673 RUNDC3AQ59EK9 446 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 TBCELQ5QJ74 424 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 COX20Q5RI15 118 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 DCST2Q5T1A1 773 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 DESI1Q6ICB0 168 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 HEPHL1Q6MZM0 1159 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 POU5F2Q8N7G0 328 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 PCYOX1LQ8NBM8 494 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 FAM98AQ8NCA5 519 aaKnown RBP13.79□□□□□ -0.2
HSPG2-201ENST00000374673 CHDHQ8NE62 594 aaPredicted RBP13.79□□□□□ -0.2
HSPG2-201ENST00000374673 OR5M3Q8NGP4 307 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 PNPT1Q8TCS8 783 aaKnown RBP13.79□□□□□ -0.2
HSPG2-201ENST00000374673 RNF138Q8WVD3 245 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 TMCO6Q96DC7 493 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 NODALQ96S42 347 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 CGREF1Q99674 301 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 G6PC3Q9BUM1 346 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 EXD2Q9NVH0 621 aa13.79□□□□□ -0.2
HSPG2-201ENST00000374673 KLRC4-KLRK1H3BQV0 150 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 HMGN4O00479 90 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 GUSBP08236 651 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 CNR1P21554 472 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 CASP3P42574 277 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 RFX3P48380 749 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 RGNQ15493 299 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 ARHGAP11BQ3KRB8 267 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.78□□□□□ -0.2
HSPG2-201ENST00000374673 CCNJQ5T5M9 372 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 FIGNL1Q6PIW4 674 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 SULF2Q8IWU5 870 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 XAGE5Q8WWM1 108 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 RAB8BQ92930 207 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 NTNG2Q96CW9 530 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 CMTM5Q96DZ9 223 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 ANKRD27Q96NW4 1050 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 SDF2Q99470 211 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 CPPED1Q9BRF8 314 aaPredicted RBP13.78□□□□□ -0.2
HSPG2-201ENST00000374673 PROK2Q9HC23 129 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 DEPPQ9NTK1 212 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 THUMPD1Q9NXG2 353 aaKnown RBP13.78□□□□□ -0.2
HSPG2-201ENST00000374673 LUZP4Q9P127 313 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.78□□□□□ -0.2
HSPG2-201ENST00000374673 CORO2BQ9UQ03 480 aa13.78□□□□□ -0.2
HSPG2-201ENST00000374673 FXYD1O00168 92 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 PEX1O43933 1283 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 HS6ST1O60243 411 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 ICOSLGO75144 302 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 RASAL1O95294 804 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 BMP2P12643 396 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 GPX2P18283 190 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 PTGDSP41222 190 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 CRATP43155 626 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 MEOX1P50221 254 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 DSTNP60981 165 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 FUT5Q11128 374 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 SNTA1Q13424 505 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 ATAD3BQ5T9A4 648 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 PRAMEF20Q5VT98 475 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 C16orf62Q7Z3J2 963 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 OR2M7Q8NG81 312 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 LRRC58Q96CX6 371 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 RCN3Q96D15 328 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 FAM173AQ9BQD7 235 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 OSBPL11Q9BXB4 747 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 ANGPTL4Q9BY76 406 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 ZNF350Q9GZX5 532 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 METTL7AQ9H8H3 244 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 IL1RL2Q9HB29 575 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 FBXO34Q9NWN3 711 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 ABCG2Q9UNQ0 655 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 LIPT1Q9Y234 373 aa13.77□□□□□ -0.21
HSPG2-201ENST00000374673 PRAMEF27A3QJZ7 478 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 PRAMEF25A6NGN4 478 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 EVPLLA8MZ36 301 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 C1QL1O75973 258 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 SNX4O95219 450 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 UTS2O95399 124 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 NGFRP08138 427 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 ETFAP13804 333 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 ATP6V1C1P21283 382 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 EVI2BP34910 448 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 DNASE1L1P49184 302 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms