RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 WDR53Q7Z5U6 358 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC3-202ENST00000373162 CLYBLQ8N0X4 340 aa16.33■□□□□ 0.2
TRAPPC3-202ENST00000373162 CIDECQ96AQ7 238 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC3-202ENST00000373162 TSSK3Q96PN8 268 aa16.33■□□□□ 0.2
TRAPPC3-202ENST00000373162 ALKBH4Q9NXW9 302 aa16.33■□□□□ 0.2
TRAPPC3-202ENST00000373162 KCNN3Q9UGI6 736 aa16.33■□□□□ 0.2
TRAPPC3-202ENST00000373162 PDPK1O15530 556 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 NKX2-2O95096 273 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 IL33O95760 270 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 IGKV1D-16P01601 117 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 BPGMP07738 259 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 EVI2BP34910 448 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 SERPINB5P36952 375 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 CLDN18P56856 261 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 ZNF844Q08AG5 666 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 HOMEZQ8IX15 550 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 GFM2Q969S9 779 aaKnown RBP16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 MTERF3Q96E29 417 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 C3orf30Q96M34 536 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 CALHM2Q9HA72 323 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 SIRT3Q9NTG7 399 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 ACSS1Q9NUB1 689 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 DDX18Q9NVP1 670 aaKnown RBP16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 JKAMPQ9P055 326 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 SENP1Q9P0U3 644 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 CLCF1Q9UBD9 225 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 ZNF629Q9UEG4 869 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 GIMAP2Q9UG22 337 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 BAIAP2L1Q9UHR4 511 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 ATP6V1HQ9UI12 483 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 RAB21Q9UL25 225 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 CBLCQ9ULV8 474 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 ABCG2Q9UNQ0 655 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 FIS1Q9Y3D6 152 aa16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 V9GYY5 206 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC3-202ENST00000373162 HRNRQ86YZ3 2850 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 IGLV3-32A0A0A0MS00 114 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 FAM221AA4D161 298 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 TTC36A6NLP5 189 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 HCRTR2O43614 444 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 ZNF708P17019 499 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 CAPN3P20807 821 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 IL12BP29460 328 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 MLC1Q15049 377 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 TESK1Q15569 626 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 APOOLQ6UXV4 268 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 TRIM42Q8IWZ5 723 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 C9orf106Q8NAJ2 232 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 OR2M3Q8NG83 312 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 FAM110BQ8TC76 370 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 TUBA1CQ9BQE3 449 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 IQCGQ9H095 443 aaKnown RBP16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 FAM120CQ9NX05 1096 aaKnown RBP16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 ZDHHC2Q9UIJ5 367 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 CAMK2AQ9UQM7 478 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 MTORP42345 2549 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 ZFHX3Q15911 3703 aa16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 SETD2Q9BYW2 2564 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC3-202ENST00000373162 GXYLT2A0PJZ3 443 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 SYT5O00445 386 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 DHRS4L1P0CG22 281 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 CHMP24386 653 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 MRPS22P82650 360 aaKnown RBP16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 HSPB3Q12988 150 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 SH2D4BQ5SQS7 431 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 CLHC1Q8NHS4 586 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 PPCDCQ96CD2 204 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 PARD6BQ9BYG5 372 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 Q9N2J8 555 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 TAS2R10Q9NYW0 307 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 OR10H1Q9Y4A9 318 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 MED12LQ86YW9 2145 aa16.3■□□□□ 0.2
TRAPPC3-202ENST00000373162 SCAMP2O15127 329 aaKnown RBP16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 AKAP10O43572 662 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 IL18BPO95998 194 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 CHEK2O96017 543 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 ACP2P11117 423 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 PRPS2P11908 318 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 KRT20P35900 424 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 ASMTP46597 345 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 ASCL1P50553 236 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 CLDN15P56746 228 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 IFFO1Q0D2I5 559 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 TOMM20Q15388 145 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 TMEM44Q2T9K0 475 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 C6orf136Q5SQH8 315 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 OR5M10Q6IEU7 315 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 IFNEQ86WN2 208 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 RIMKLAQ8IXN7 391 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 OR14L1PQ8NHC6 308 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 PSMA8Q8TAA3 256 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 ZBED6CLQ96FA7 236 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 TRIB1Q96RU8 372 aa16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 EML4Q9HC35 981 aaKnown RBP16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 SSU72Q9NP77 194 aaKnown RBP16.29■□□□□ 0.2
TRAPPC3-202ENST00000373162 SPG11Q96JI7 2443 aa16.28■□□□□ 0.2
TRAPPC3-202ENST00000373162 DVL2O14641 736 aa16.28■□□□□ 0.2
TRAPPC3-202ENST00000373162 SCO2O43819 266 aa16.28■□□□□ 0.2
TRAPPC3-202ENST00000373162 NGFRP08138 427 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms