RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ARSBP15848 533 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 PTPN2P17706 415 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 RAB28P51157 221 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 LRIT3Q3SXY7 679 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 ZNF582Q96NG8 517 aaPredicted RBP14.53□□□□□ -0.08
COL5A1-201ENST00000371817 SCN9AQ15858 1988 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 SIX6O95475 246 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 HOXD13P35453 343 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 ERVK-21P61565 698 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 RAB3CQ96E17 227 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 ACTL8Q9H568 366 aa14.53□□□□□ -0.08
COL5A1-201ENST00000371817 PPP5D1E7EU14 171 aa14.52□□□□□ -0.08
COL5A1-201ENST00000371817 OR52E2Q8NGJ4 325 aa14.52□□□□□ -0.08
COL5A1-201ENST00000371817 SLC2A12Q8TD20 617 aa14.52□□□□□ -0.08
COL5A1-201ENST00000371817 TMEM234Q8WY98 164 aa14.52□□□□□ -0.08
COL5A1-201ENST00000371817 RAB8BQ92930 207 aa14.52□□□□□ -0.08
COL5A1-201ENST00000371817 LPPQ93052 612 aa14.52□□□□□ -0.08
COL5A1-201ENST00000371817 TRBV23OR9-2A0A075B6M9 112 aa14.52□□□□□ -0.08
COL5A1-201ENST00000371817 ZDHHC4Q9NPG8 344 aa14.52□□□□□ -0.08
COL5A1-201ENST00000371817 HLA-FP30511 346 aa14.52□□□□□ -0.08
COL5A1-201ENST00000371817 CMASQ8NFW8 434 aaPredicted RBP14.52□□□□□ -0.08
COL5A1-201ENST00000371817 HMGB4Q8WW32 186 aa14.52□□□□□ -0.08
COL5A1-201ENST00000371817 TFAP2CQ92754 450 aa14.52□□□□□ -0.08
COL5A1-201ENST00000371817 PCDHA2Q9Y5H9 948 aa14.52□□□□□ -0.08
COL5A1-201ENST00000371817 CST3P01034 146 aaPredicted RBP14.52□□□□□ -0.09
COL5A1-201ENST00000371817 HLA-DOBP13765 273 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 SNCAP37840 140 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 FASLGP48023 281 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 EEF1A2Q05639 463 aaKnown RBP14.52□□□□□ -0.09
COL5A1-201ENST00000371817 SLC10A1Q14973 349 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 MSS51Q4VC12 460 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 B3GNT7Q8NFL0 401 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 PITX2Q99697 317 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 CKAP5Q14008 2032 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 ANKRD28O15084 1053 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 OR13C4Q8NGS5 318 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 ST8SIA4Q92187 359 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 PTCHD1Q96NR3 888 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF587Q96SQ5 575 aaPredicted RBP14.52□□□□□ -0.09
COL5A1-201ENST00000371817 CERS4Q9HA82 394 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 SIAEQ9HAT2 523 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 MSTNO14793 375 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 OAS1P00973 400 aaKnown RBP14.52□□□□□ -0.09
COL5A1-201ENST00000371817 AKR1A1P14550 325 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 GABRR2P28476 465 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 PLBD1Q6P4A8 553 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 GPR155Q7Z3F1 870 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 VSIG10LQ86VR7 867 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 TCTE3Q8IZS6 198 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 C2CD4AQ8NCU7 369 aaPredicted RBP14.52□□□□□ -0.09
COL5A1-201ENST00000371817 OR5M3Q8NGP4 307 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 BCAS3Q9H6U6 928 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 RYDENQ9NUL5 291 aaKnown RBP14.52□□□□□ -0.09
COL5A1-201ENST00000371817 GPR52Q9Y2T5 361 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 WIF1Q9Y5W5 379 aa14.52□□□□□ -0.09
COL5A1-201ENST00000371817 TMEM72A0PK05 275 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 D6RAR5 112 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 FABP7O15540 132 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 GJB1P08034 283 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 PRPH2P23942 346 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 HOXA9P31269 272 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 SGSHP51688 502 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 DIO3P55073 304 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 SF3B4Q15427 424 aaKnown RBP eCLIP14.51□□□□□ -0.09
COL5A1-201ENST00000371817 PDLIM3Q53GG5 364 aaPredicted RBP14.51□□□□□ -0.09
COL5A1-201ENST00000371817 REM2Q8IYK8 340 aaPredicted RBP14.51□□□□□ -0.09
COL5A1-201ENST00000371817 PRSS58Q8IYP2 241 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.51□□□□□ -0.09
COL5A1-201ENST00000371817 AVL9Q8NBF6 648 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 ADIPOR1Q96A54 375 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 BACE2Q9Y5Z0 518 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 CDHR4A6H8M9 788 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 SPI1P17947 270 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 FECHP22830 423 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 LAP3P28838 519 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 SLC1A3P43003 542 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 CCNJQ5T5M9 372 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 ADAM5Q6NVV9 412 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 SAMD7Q7Z3H4 446 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 OR6T1Q8NGN1 323 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 AKR7LQ8NHP1 331 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 UPRTQ96BW1 309 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 PKMYT1Q99640 499 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 GAB2Q9UQC2 676 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 FABP1P07148 127 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 METTL15P1P0C7V9 234 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 SORDQ00796 357 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 MALLQ13021 153 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 APOBEC3HQ6NTF7 200 aaKnown RBP14.51□□□□□ -0.09
COL5A1-201ENST00000371817 SLC51BQ86UW2 128 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 SLC29A1Q99808 456 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 FCF1Q9Y324 198 aaKnown RBP14.51□□□□□ -0.09
COL5A1-201ENST00000371817 SEC14L5O43304 696 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 LATO43561 262 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 TNFSF8P32971 234 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 MSLNLQ96KJ4 702 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 DCDC2BA2VCK2 349 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 NPIPA2E9PIF3 369 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 NPIPA3F8WFD2 350 aa14.51□□□□□ -0.09
COL5A1-201ENST00000371817 IL1AP01583 271 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms