RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 OR2G6Q5TZ20 316 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 LINC00299Q6ZSB3 139 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 LRIG1Q96JA1 1093 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 PFDN5Q99471 154 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 USP3Q9Y6I4 520 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 ANKRD34BA5PLL1 514 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 GLP1RP43220 463 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 ACSM3Q53FZ2 586 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 GPR26Q8NDV2 337 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 OR5D16Q8NGK9 328 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 OR5AK2Q8NH90 309 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 NEIL2Q969S2 332 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 TEX37Q96LM6 180 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 PRRC1Q96M27 445 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 ACTRT3Q9BYD9 372 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 A0A1W2PQ45 241 aaPredicted RBP15.06■□□□□ 0
COL17A1-202ENST00000369733 A0A1W2PQY0 241 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 TTC34A8MYJ7 566 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 FRS3O43559 492 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 POLR2CP19387 275 aaPredicted RBP15.06■□□□□ 0
COL17A1-202ENST00000369733 CRHR2Q13324 411 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 BTN1A1Q13410 526 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 SLC35F2Q8IXU6 374 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 ZNF565Q8N9K5 539 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 CYB561A3Q8NBI2 242 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 OR51L1Q8NGJ5 315 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 FBXL12Q9NXK8 326 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 B4DGG1 531 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 GASTP01350 101 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 LRRC26Q2I0M4 334 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 ERN2Q76MJ5 926 aaKnown RBP15.06■□□□□ 0
COL17A1-202ENST00000369733 PXYLP1Q8TE99 480 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 MYO18AQ92614 2054 aaKnown RBP15.06■□□□□ 0
COL17A1-202ENST00000369733 ICMTO60725 284 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 UGT2B7P16662 529 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 CD70P32970 193 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 CTSOP43234 321 aaPredicted RBP15.06■□□□□ 0
COL17A1-202ENST00000369733 SH2D5Q6ZV89 423 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 NRSN1Q8IZ57 195 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 ARL14Q8N4G2 192 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 CMKLR1Q99788 373 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 C11orf54Q9H0W9 315 aaPredicted RBP15.06■□□□□ 0
COL17A1-202ENST00000369733 SDHAF3Q9NRP4 125 aa15.06■□□□□ 0
COL17A1-202ENST00000369733 RBFOX1Q9NWB1 397 aaKnown RBP15.06■□□□□ 0
COL17A1-202ENST00000369733 GABRPO00591 440 aa15.05■□□□□ 0
COL17A1-202ENST00000369733 RBMS1P29558 406 aaKnown RBP15.05■□□□□ 0
COL17A1-202ENST00000369733 BLKP51451 505 aa15.05■□□□□ 0
COL17A1-202ENST00000369733 METAP1DQ6UB28 335 aaPredicted RBP15.05■□□□□ 0
COL17A1-202ENST00000369733 KCTD20Q7Z5Y7 419 aa15.05■□□□□ 0
COL17A1-202ENST00000369733 OR13C3Q8NGS6 347 aa15.05■□□□□ 0
COL17A1-202ENST00000369733 CNTNAP3BQ96NU0 1288 aa15.05■□□□□ 0
COL17A1-202ENST00000369733 OR5M11Q96RB7 305 aa15.05■□□□□ 0
COL17A1-202ENST00000369733 SORBS1Q9BX66 1292 aaKnown RBP15.05■□□□□ 0
COL17A1-202ENST00000369733 GOLGA4Q13439 2230 aaKnown RBP15.05■□□□□ 0
COL17A1-202ENST00000369733 TEX51A0A1B0GUA7 166 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 C1orf196B1AJZ1 125 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 H2BFMP0C1H6 154 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 VSX2P58304 361 aaPredicted RBP15.05■□□□□ -0
COL17A1-202ENST00000369733 HERV-K104P61576 105 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 AAK1Q2M2I8 961 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 LEG1Q6P5S2 330 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 IL20RBQ6UXL0 311 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 OR4N5Q8IXE1 308 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 KLHDC8AQ8IYD2 350 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 SLAIN1Q8ND83 568 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 ARL11Q969Q4 196 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 IGSF21Q96ID5 467 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 METTL2AQ96IZ6 378 aaKnown RBP15.05■□□□□ -0
COL17A1-202ENST00000369733 RBP7Q96R05 134 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 RAD9AQ99638 391 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 DPYSL5Q9BPU6 564 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 SPHK2Q9NRA0 654 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 NDUFAF4Q9P032 175 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 CASC3O15234 703 aaKnown RBP15.05■□□□□ -0
COL17A1-202ENST00000369733 TACR1P25103 407 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 RTP2Q5QGT7 225 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 CFAP77Q6ZQR2 320 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 PLA2G15Q8NCC3 412 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 TMEM185AQ8NFB2 350 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 SULT1C4O75897 302 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 PRSS3P35030 304 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 DDOSTP39656 456 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 GP2P55259 537 aaKnown RBP15.05■□□□□ -0
COL17A1-202ENST00000369733 RRAS2P62070 204 aaPredicted RBP15.05■□□□□ -0
COL17A1-202ENST00000369733 MGAT3Q09327 533 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 ALG10BQ5I7T1 473 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 SERPINA12Q8IW75 414 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 OR5T2Q8NGG2 359 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 ZMYND19Q96E35 227 aaPredicted RBP15.05■□□□□ -0
COL17A1-202ENST00000369733 TUBB1Q9H4B7 451 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 CSNK1G1Q9HCP0 422 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 KCNIP3Q9Y2W7 256 aa15.05■□□□□ -0
COL17A1-202ENST00000369733 GPR89AB7ZAQ6 455 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 H7C417 338 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 ACOT7O00154 380 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 AK1P00568 194 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 GPR89BP0CG08 455 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 ISL1P61371 349 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 RPS25P62851 125 aaKnown RBP15.04■□□□□ -0
COL17A1-202ENST00000369733 MC2RQ01718 297 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms