RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 KRR1Q13601 381 aaKnown RBP16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 PLEKHM3Q6ZWE6 761 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 CAMKK1Q8N5S9 505 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 TMEM255BQ8WV15 326 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 SLC25A46Q96AG3 418 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 PLRG1O43660 514 aaKnown RBP16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 SLC2A10O95528 541 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 SOX18P35713 384 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 CASP3P42574 277 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 RAB40BQ12829 278 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 TMEM196Q5HYL7 178 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 C3orf38Q5JPI3 329 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 C9orf50Q5SZB4 431 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 B3GLCTQ6Y288 498 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 OR4Q3Q8NH05 313 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 PIGXQ8TBF5 258 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 CD93Q9NPY3 652 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 ZNF624Q9P2J8 865 aaPredicted RBP16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 CMAHPQ9Y471 501 aa16.93■□□□□ 0.3
UBQLN4-201ENST00000368309 A0A1W2PQL4 384 aaPredicted RBP16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 SYT5O00445 386 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 AP3D1O14617 1153 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 LINC01565O15544 149 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 PBX2P40425 430 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 NR4A2P43354 598 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 FBXO42Q6P3S6 717 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 OR1E3Q8WZA6 343 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 OR2M4Q96R27 311 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 KLHL28Q9NXS3 571 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 LIPT1Q9Y234 373 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 CENPVL1A0A0U1RR11 272 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 ZNF860A6NHJ4 632 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 LIMS3P0CW19 117 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 LIMS4P0CW20 117 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 CPN2P22792 545 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 ERVK-21P61565 698 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 ARMC4Q5T2S8 1044 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 NXNL2Q5VZ03 156 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 PAQR7Q86WK9 346 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 ARSGQ96EG1 525 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 C10orf90Q96M02 699 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 SARGQ9BW04 601 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 SRMSQ9H3Y6 488 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 MARCH7Q9H992 704 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 CDH11P55287 796 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 BNC1Q01954 994 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 FAM214AQ32MH5 1076 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 FAM131AQ6UXB0 335 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 RASSF6Q6ZTQ3 369 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 GDF7Q7Z4P5 450 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 BBS1Q8NFJ9 593 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 WBP1LQ9NX94 342 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 PLEKHB1Q9UF11 243 aaPredicted RBP16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 CSNK1G3Q9Y6M4 447 aa16.92■□□□□ 0.3
UBQLN4-201ENST00000368309 DOCK8Q8NF50 2099 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 LALBAP00709 142 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 IFNA8P32881 189 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 GPR68Q15743 365 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 PLK5Q496M5 336 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 TMEM31Q5JXX7 168 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 FRRS1Q6ZNA5 592 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 ASPGQ86U10 573 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 KIR3DX1Q9H7L2 352 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 OR6C2Q9NZP2 312 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 TRAPPC4Q9Y296 219 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 SSTR4P31391 388 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 MAGEA8P43361 318 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 OR2B6P58173 313 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 FABP5Q01469 135 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 PUS10Q3MIT2 529 aaKnown RBP16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 PRAMEF8Q5VWM4 474 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 PRAMEF7Q5VXH5 474 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 MFSD12Q6NUT3 480 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 GALNT12Q8IXK2 581 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 Q8N9G6 341 aaPredicted RBP16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 OR10G6Q8NH81 332 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 SLC41A3Q96GZ6 507 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 DIRAS2Q96HU8 199 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 KCTD7Q96MP8 289 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 MIXL1Q9H2W2 232 aa16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 FGF20Q9NP95 211 aaPredicted RBP16.91■□□□□ 0.3
UBQLN4-201ENST00000368309 FAM183AA6NL82 134 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 SNTNA6NMZ2 147 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 ACTR1BP42025 376 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 ACTR1AP61163 376 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 INSL4Q14641 139 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 CEBPEQ15744 281 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 MINDY4Q4G0A6 757 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 TRMT12Q53H54 448 aaKnown RBP16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 LRRC25Q8N386 305 aaPredicted RBP16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 PHOX2BQ99453 314 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 C1QTNF7Q9BXJ2 289 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 MTIF3Q9H2K0 278 aaKnown RBP16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 CALML5Q9NZT1 146 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 SLC7A7Q9UM01 511 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 WDR45Q9Y484 360 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 CDC42EP2O14613 210 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 P2RX6O15547 441 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 DYRK3O43781 588 aa16.9■□□□□ 0.3
UBQLN4-201ENST00000368309 CTSVO60911 334 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms