RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 OTUB1Q96FW1 271 aaPredicted RBP20.5■□□□□ 0.87
ECHDC1-203ENST00000368291 EBF4Q9BQW3 602 aa20.5■□□□□ 0.87
ECHDC1-203ENST00000368291 GPATCH2Q9NW75 528 aa20.5■□□□□ 0.87
ECHDC1-203ENST00000368291 QPCTLQ9NXS2 382 aa20.5■□□□□ 0.87
ECHDC1-203ENST00000368291 KLRF1Q9NZS2 232 aa20.5■□□□□ 0.87
ECHDC1-203ENST00000368291 SH3BGRL2Q9UJC5 107 aa20.5■□□□□ 0.87
ECHDC1-203ENST00000368291 PHF3Q92576 2039 aaKnown RBP20.5■□□□□ 0.87
ECHDC1-203ENST00000368291 A0A1B0GUH1 482 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 PRSS51A0A1B0GVH4 220 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 B4DXG7 233 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 GNB5O14775 395 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 SNPHO15079 494 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 TGDSO95455 350 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 IDO1P14902 403 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 ABOP16442 354 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 ENDOUP21128 410 aaKnown RBP20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 PTPN6P29350 595 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 PTGS2P35354 604 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 ZFP36L2P47974 494 aaKnown RBP20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 MASP1P48740 699 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 IDH3AP50213 366 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 DPY19L1Q2PZI1 675 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 VPS26BQ4G0F5 336 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 PDCD4Q53EL6 469 aaKnown RBP20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 ARHGAP11AQ6P4F7 1023 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 ANGPTL8Q6UXH0 198 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 DOLPP1Q86YN1 238 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 WDSUB1Q8N9V3 476 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 OR56A1Q8NGH5 318 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 OR5AK3PQ8NH89 298 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 RMND5BQ96G75 393 aaPredicted RBP20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 ACKR4Q9NPB9 350 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 C15orf41Q9Y2V0 281 aa20.49■□□□□ 0.87
ECHDC1-203ENST00000368291 SUSD5O60279 629 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 FADS1O60427 444 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 MAN2A2P49641 1150 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 PRIM2P49643 509 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 DGKQP52824 942 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 TP53BP2Q13625 1128 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 CDC73Q6P1J9 531 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 PAOXQ6QHF9 649 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 CLEC4FQ8N1N0 589 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 OR1J4Q8NGS1 313 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 FAM57AQ8TBR7 257 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 RTN4RQ9BZR6 473 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 SDR39U1Q9NRG7 319 aaPredicted RBP20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 FBXO34Q9NWN3 711 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 PTPN13Q12923 2485 aa20.48■□□□□ 0.87
ECHDC1-203ENST00000368291 C17orf51A8MQB3 221 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 UBDO15205 165 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 KCNK2O95069 426 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 ALOX5P09917 674 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 ELAVL4P26378 380 aaKnown RBP20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 GDF1P27539 372 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 S100A3P33764 101 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 EVI2BP34910 448 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 GSTA3Q16772 222 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 SPDYE7PQ495Y7 208 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 EMC4Q5J8M3 183 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 ANXA8L1Q5VT79 327 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 ZAR1Q86SH2 424 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 OR4A15Q8NGL6 344 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 MOAP1Q96BY2 351 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 PSMG3-AS1Q96PY0 264 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 PHF12Q96QT6 1004 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 STACQ99469 402 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 ACTRT3Q9BYD9 372 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 SLC6A15Q9H2J7 730 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 PIGUQ9H490 435 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 SERHL2Q9H4I8 314 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 TCF7L2Q9NQB0 619 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 DUSP22Q9NRW4 184 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 FAM120CQ9NX05 1096 aaKnown RBP20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 GIN1Q9NXP7 522 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 SPRR3Q9UBC9 169 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 B4GALT7Q9UBV7 327 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 WIF1Q9Y5W5 379 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 KCNE3Q9Y6H6 103 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 ARHGAP21Q5T5U3 1957 aa20.47■□□□□ 0.87
ECHDC1-203ENST00000368291 CCL21O00585 134 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 AQP7O14520 342 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 HCN1O60741 890 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 KCNH1O95259 989 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 HPNP05981 417 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 SOAT1P35610 550 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 RFX3P48380 749 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 GALNT10Q86SR1 603 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 CD163Q86VB7 1156 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 JADE3Q92613 823 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 CDS1Q92903 461 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 TNFRSF10DQ9UBN6 386 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 MRTO4Q9UKD2 239 aaKnown RBP20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 TRGV5A0A0B4J1U4 118 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 NPIPA2E9PIF3 369 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 NPIPA3F8WFD2 350 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 EDF1O60869 148 aaKnown RBP20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 UTS2O95399 124 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 CPSF4O95639 269 aaKnown RBP20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 PGRP06401 933 aa20.46■□□□□ 0.87
ECHDC1-203ENST00000368291 TRPC1P48995 793 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms