RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ZNF784Q8NCA9 323 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-207ENST00000368226 MGLLQ99685 303 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 NUDT22Q9BRQ3 303 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 KLHL33A6NCF5 533 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 DDCP20711 480 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 ACTC1P68032 377 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 ACTA1P68133 377 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 ZNF33BQ06732 778 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 C6orf89Q6UWU4 347 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 CNEP1R1Q8N9A8 125 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 CLEC1AQ8NC01 280 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 OR13J1Q8NGT2 312 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 INSM2Q96T92 566 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-207ENST00000368226 NXF5Q9H1B4 397 aaKnown RBP12.18□□□□□ -0.46
PTPRK-207ENST00000368226 PCDHB16Q9NRJ7 776 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 PAK1IP1Q9NWT1 392 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-207ENST00000368226 SLC22A31A6NKX4 558 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 C1orf105O95561 183 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 GYPBP06028 91 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 EEF1A1P68104 462 aaKnown RBP12.18□□□□□ -0.46
PTPRK-207ENST00000368226 C3orf38Q5JPI3 329 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 CDKL4Q5MAI5 379 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 PTCRAQ6ISU1 281 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-207ENST00000368226 SLC18B1Q6NT16 456 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 OR6C4Q8NGE1 309 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 MKS1Q9NXB0 559 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 A0A1B0GV50 99 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 GRXCR2A6NFK2 248 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 GABRR3A8MPY1 467 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 AK1P00568 194 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 HMGN2P05204 90 aaKnown RBP12.18□□□□□ -0.46
PTPRK-207ENST00000368226 AKR1C4P17516 323 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 DCST2Q5T1A1 773 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 TMEM184AQ6ZMB5 413 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 ULBP3Q9BZM4 244 aa12.18□□□□□ -0.46
PTPRK-207ENST00000368226 TUBA8Q9NY65 449 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-207ENST00000368226 SLITRK5O94991 958 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 LCATP04180 440 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 IRS1P35568 1242 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 RGS19P49795 217 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 SPHARQ15513 63 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 RUNDC3AQ59EK9 446 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 RAB41Q5JT25 222 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 OR8J1Q8NGP2 316 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 ADAMTS18Q8TE60 1221 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 C3orf30Q96M34 536 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 CTRCQ99895 268 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 MARCH5Q9NX47 278 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 EBF1Q9UH73 591 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 TRAV27A0A087WT01 109 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 SH3PXD2BA1X283 911 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 G3V3Y1 287 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 TMEM189-UBE2V1I3L0A0 370 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 EGFP01133 1207 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 TMEM225BP0DP42 221 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 PNMTP11086 282 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 CCDC58Q4VC31 144 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 TUBA3EQ6PEY2 450 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 VRK2Q86Y07 508 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 LSM14AQ8ND56 463 aaKnown RBP12.17□□□□□ -0.46
PTPRK-207ENST00000368226 LRRC20Q8TCA0 184 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 LKAAEAR1Q8TD35 194 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 ZNF480Q8WV37 535 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 CHFRQ96EP1 664 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 MROH6A6NGR9 719 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 SOCS7O14512 581 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 BCAT2O15382 392 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-207ENST00000368226 SLC19A2O60779 497 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 RBBP9O75884 186 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 ATF4P18848 351 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-207ENST00000368226 LSSP48449 732 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 TMIEQ8NEW7 156 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 RTP3Q9BQQ7 232 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 VSX1Q9NZR4 365 aaPredicted RBP12.17□□□□□ -0.46
PTPRK-207ENST00000368226 SIT1Q9Y3P8 196 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 IER3IP1Q9Y5U9 82 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 ANTXRLA6NF34 631 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 TNFRSF4P43489 277 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 ZNF440Q8IYI8 595 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 ANKLE1Q8NAG6 615 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 KDM1BQ8NB78 822 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 C15orf40Q8WUR7 153 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 EGLN2Q96KS0 407 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 OR4K3Q96R72 315 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 SLC6A16Q9GZN6 736 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 KLHL9Q9P2J3 617 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 B3GALT1Q9Y5Z6 326 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 H0YAE9 185 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 HTR3BO95264 441 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 MTNR1AP48039 350 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 MS4A2Q01362 244 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 IL20RBQ6UXL0 311 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 PGBD5Q8N414 524 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 DTWD1Q8N5C7 304 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 C7orf34Q96L11 122 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 SYNPO2LQ9H987 977 aa12.17□□□□□ -0.46
PTPRK-207ENST00000368226 A0A0A6YYH2 397 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 A6NJ64 397 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 SSX5O60225 188 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 PRKRAO75569 313 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms