RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 PCDHGB3Q9Y5G1 929 aa21.82■■□□□ 1.08
PFDN2-201ENST00000368010 NCKAP5O14513 1909 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 NKX2-2O95096 273 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 IL33O95760 270 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 EVI2BP34910 448 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 NUP107P57740 925 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 CDSNQ15517 529 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 LSM12Q3MHD2 195 aaKnown RBP21.81■■□□□ 1.08
PFDN2-201ENST00000368010 EIPR1Q53HC9 387 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 WIPI1Q5MNZ9 446 aaPredicted RBP21.81■■□□□ 1.08
PFDN2-201ENST00000368010 C1orf185Q5T7R7 199 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 AGBL2Q5U5Z8 902 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 ATG16L1Q676U5 607 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 SP5Q6BEB4 398 aaPredicted RBP21.81■■□□□ 1.08
PFDN2-201ENST00000368010 LRRC34Q8IZ02 419 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 FAM83FQ8NEG4 500 aaPredicted RBP21.81■■□□□ 1.08
PFDN2-201ENST00000368010 RAB3IL1Q8TBN0 382 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 CA5BP1Q8WTZ4 195 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 PIK3R3Q92569 461 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 SLC9A6Q92581 669 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 FAM120BQ96EK7 910 aaKnown RBP21.81■■□□□ 1.08
PFDN2-201ENST00000368010 GIMAP5Q96F15 307 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 BHLHE41Q9C0J9 482 aaPredicted RBP21.81■■□□□ 1.08
PFDN2-201ENST00000368010 CHST11Q9NPF2 352 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 SIRT3Q9NTG7 399 aaPredicted RBP21.81■■□□□ 1.08
PFDN2-201ENST00000368010 ZCCHC3Q9NUD5 404 aaKnown RBP21.81■■□□□ 1.08
PFDN2-201ENST00000368010 ABCG2Q9UNQ0 655 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 SLC6A5Q9Y345 797 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 FAM215AQ9Y5M1 114 aa21.81■■□□□ 1.08
PFDN2-201ENST00000368010 HOXD4P09016 255 aaPredicted RBP21.8■■□□□ 1.08
PFDN2-201ENST00000368010 LBPP18428 481 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 GRNP28799 593 aaKnown RBP21.8■■□□□ 1.08
PFDN2-201ENST00000368010 PTGER4P35408 488 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 GCKP35557 465 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 MAP3K8P41279 467 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 PRIM2P49643 509 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 DIO3P55073 304 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 CRYZQ08257 329 aaKnown RBP21.8■■□□□ 1.08
PFDN2-201ENST00000368010 PMPCAQ10713 525 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 MFSD12Q6NUT3 480 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 ZCCHC12Q6PEW1 402 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 YRDCQ86U90 279 aaKnown RBP21.8■■□□□ 1.08
PFDN2-201ENST00000368010 FBXO30Q8TB52 745 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 NUDT8Q8WV74 236 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 ASB5Q8WWX0 329 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 RMND5BQ96G75 393 aaPredicted RBP21.8■■□□□ 1.08
PFDN2-201ENST00000368010 TTYH2Q9BSA4 534 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 DUSP26Q9BV47 211 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 MEAF6Q9HAF1 191 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 NEUROD4Q9HD90 331 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 FAM120CQ9NX05 1096 aaKnown RBP21.8■■□□□ 1.08
PFDN2-201ENST00000368010 SNX8Q9Y5X2 465 aa21.8■■□□□ 1.08
PFDN2-201ENST00000368010 GXYLT2A0PJZ3 443 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 SCO2O43819 266 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 SNNO75324 88 aaPredicted RBP21.79■■□□□ 1.08
PFDN2-201ENST00000368010 C6orf47O95873 294 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 CHRNB4P30926 498 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 CLK3P49761 638 aaKnown RBP21.79■■□□□ 1.08
PFDN2-201ENST00000368010 GAS1P54826 345 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 NHSL2Q5HYW2 709 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 RTL6Q6ICC9 239 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 CAMKMTQ7Z624 323 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 ULK2Q8IYT8 1036 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 TIMP4Q99727 224 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 OR2B2Q9GZK3 357 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 MANSC1Q9H8J5 431 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 SDHAF3Q9NRP4 125 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 RNF6Q9Y252 685 aa21.79■■□□□ 1.08
PFDN2-201ENST00000368010 PCNX1Q96RV3 2341 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 FADS1O60427 444 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 ALOX5P09917 674 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 GLI4P10075 376 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 ACP2P11117 423 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 PGS1Q32NB8 556 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 SPDYE7PQ495Y7 208 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 VASNQ6EMK4 673 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 OR5M10Q6IEU7 315 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 PM20D2Q8IYS1 436 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 SLC16A11Q8NCK7 471 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 OR56A1Q8NGH5 318 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 OR14L1PQ8NHC6 308 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 PSMA8Q8TAA3 256 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 JADE3Q92613 823 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 ARL8AQ96BM9 186 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 C16orf58Q96GQ5 468 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 UGT2B28Q9BY64 529 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 DPY30Q9C005 99 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 ARGLU1Q9NWB6 273 aaPredicted RBP21.78■■□□□ 1.08
PFDN2-201ENST00000368010 FLRT3Q9NZU0 649 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 PPP4R1LQ9P1A2 415 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 FBXL2Q9UKC9 423 aa21.78■■□□□ 1.08
PFDN2-201ENST00000368010 HDAC3O15379 428 aa21.77■■□□□ 1.08
PFDN2-201ENST00000368010 CFLARO15519 480 aa21.77■■□□□ 1.08
PFDN2-201ENST00000368010 HNRNPRO43390 633 aaKnown RBP21.77■■□□□ 1.08
PFDN2-201ENST00000368010 ACTL6AO96019 429 aa21.77■■□□□ 1.08
PFDN2-201ENST00000368010 HMGN2P05204 90 aaKnown RBP21.77■■□□□ 1.08
PFDN2-201ENST00000368010 BMP7P18075 431 aa21.77■■□□□ 1.08
PFDN2-201ENST00000368010 SRD5A2P31213 254 aa21.77■■□□□ 1.08
PFDN2-201ENST00000368010 LASP1Q14847 261 aaKnown RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms