RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 FRMD7Q6ZUT3 714 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 TGIF2LYQ8IUE0 185 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 MEIOBQ8N635 442 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 RNF138Q8WVD3 245 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 INTS12Q96CB8 462 aaKnown RBP13.45□□□□□ -0.26
CTSD-202ENST00000367196 TAS2R7Q9NYW3 318 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 NDRG3Q9UGV2 375 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 C19orf53Q9UNZ5 99 aaPredicted RBP13.45□□□□□ -0.26
CTSD-202ENST00000367196 PLEKHA6Q9Y2H5 1048 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 PRRC2AP48634 2157 aaKnown RBP13.45□□□□□ -0.26
CTSD-202ENST00000367196 ZFHX3Q15911 3703 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 CASKO14936 926 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 HCRTR2O43614 444 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 UROSP10746 265 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 MC3RP41968 323 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 CLDN18P56856 261 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 DNAJB13P59910 316 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 PSG6Q00889 435 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 KEAP1Q14145 624 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 FGFBP1Q14512 234 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 SH2D4BQ5SQS7 431 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 RAET1LQ5VY80 246 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 OR5M10Q6IEU7 315 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 FAM71E1Q6IPT2 247 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 TMEM107Q6UX40 140 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 TRIM46Q7Z4K8 759 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 LUZP2Q86TE4 346 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 OR2L13Q8N349 312 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 CCDC63Q8NA47 563 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 MZB1Q8WU39 189 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 TMUB1Q9BVT8 246 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 FAM120CQ9NX05 1096 aaKnown RBP13.44□□□□□ -0.26
CTSD-202ENST00000367196 GALNT8Q9NY28 637 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 STOML1Q9UBI4 398 aa13.44□□□□□ -0.26
CTSD-202ENST00000367196 POLR3HQ9Y535 204 aaPredicted RBP13.44□□□□□ -0.26
CTSD-202ENST00000367196 MED12LQ86YW9 2145 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 SH3D21A4FU49 640 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 SLC22A20A6NK97 555 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 G3V2L1 256 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 SCO2O43819 266 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 KCNH1O95259 989 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 DDX5P17844 614 aaKnown RBP13.43□□□□□ -0.26
CTSD-202ENST00000367196 PCYT1AP49585 367 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 STARP49675 285 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 GAS1P54826 345 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 FOXA1P55317 472 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 FOXF2Q12947 444 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 VPS26BQ4G0F5 336 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 FAM219BQ5XKK7 198 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 GCNT2Q8N0V5 402 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 FADS6Q8N9I5 356 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 EIF1ADQ8N9N8 165 aaKnown RBP13.43□□□□□ -0.26
CTSD-202ENST00000367196 ZFP28Q8NHY6 868 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 LINC01560Q8TB33 94 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 SMPDL3BQ92485 455 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 AMDHD1Q96NU7 426 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 RHOXF2Q9BQY4 288 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 PIGQQ9BRB3 760 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 TXLNGYQ9BZA5 131 aa13.43□□□□□ -0.26
CTSD-202ENST00000367196 EIF3LQ9Y262 564 aaKnown RBP13.43□□□□□ -0.26
CTSD-202ENST00000367196 RPH3AQ9Y2J0 694 aaPredicted RBP13.43□□□□□ -0.26
CTSD-202ENST00000367196 UPK1AO00322 258 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 SLC28A1O00337 649 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 UBFD1O14562 309 aaKnown RBP13.42□□□□□ -0.26
CTSD-202ENST00000367196 COPEO14579 308 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 MSTNO14793 375 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 RGS14O43566 566 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 ZIC3O60481 467 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 PSMG1O95456 288 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 IL33O95760 270 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 CHEK2O96017 543 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 PROCP04070 461 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 NEFHP12036 1026 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 HK1P19367 917 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 KLK2P20151 261 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 PRPH2P23942 346 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 CRHR1P34998 444 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 CPOXP36551 454 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 LIPMQ5VYY2 423 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 NOXRED1Q6NXP6 359 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 OR2M3Q8NG83 312 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 OR4N2Q8NGD1 307 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.42□□□□□ -0.26
CTSD-202ENST00000367196 ELP4Q96EB1 424 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 ZNF764Q96H86 408 aaPredicted RBP13.42□□□□□ -0.26
CTSD-202ENST00000367196 G6PC3Q9BUM1 346 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 TBL1XR1Q9BZK7 514 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 LIME1Q9H400 295 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 DSN1Q9H410 356 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 GLIPR2Q9H4G4 154 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 OXSMQ9NWU1 459 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 EMCNQ9ULC0 261 aa13.42□□□□□ -0.26
CTSD-202ENST00000367196 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 A0A1W2PNV4 684 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 A8MXE2 369 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 NPIPB8E9PQR5 432 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 PDPK1O15530 556 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 FADS1O60427 444 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 PLIN3O60664 434 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 SEC22BO75396 215 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms