RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 PSD4Q8NDX1 1056 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 OR4N2Q8NGD1 307 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 OR8J3Q8NGG0 315 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 SPPL2AQ8TCT8 520 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 PIK3R3Q92569 461 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 HGDQ93099 445 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 ANKRD27Q96NW4 1050 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 SIGLEC12Q96PQ1 595 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 HOPXQ9BPY8 73 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 YIPF4Q9BSR8 244 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 HOXD1Q9GZZ0 328 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 SERHL2Q9H4I8 314 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 SACM1LQ9NTJ5 587 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 ANKRD10Q9NXR5 420 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 ANAPC2Q9UJX6 822 aa12.72□□□□□ -0.37
NSMCE1-201ENST00000361439 ZFYVE26Q68DK2 2539 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 C15orf38-AP3S2A0A0A6YYH1 394 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 TMEM247A6NEH6 219 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 NME6O75414 186 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 UNC5CO95185 931 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 SNX4O95219 450 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 CRATP43155 626 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 CD97P48960 835 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 FBXW4P57775 412 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 RPS26P62854 115 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 GTDC1Q4AE62 458 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 DCST2Q5T1A1 773 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 SLC6A19Q695T7 634 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 WDR53Q7Z5U6 358 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 ARPINQ7Z6K5 226 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 FITM2Q8N6M3 262 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 FAM98AQ8NCA5 519 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 FAM13CQ8NE31 585 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 CATSPER1Q8NEC5 780 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 OR10G3Q8NGC4 313 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 OR5D16Q8NGK9 328 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 RNF138Q8WVD3 245 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 XAGE5Q8WWM1 108 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 CDS1Q92903 461 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 LRRC58Q96CX6 371 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 RMND5BQ96G75 393 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 TRNT1Q96Q11 434 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 ADOQ96SZ5 270 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 CALML5Q9NZT1 146 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 TAGLN3Q9UI15 199 aa12.71□□□□□ -0.37
NSMCE1-201ENST00000361439 ATRXP46100 2492 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 GXYLT2A0PJZ3 443 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 UGT2B11O75310 529 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 STX11O75558 287 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 OR12D1P0DN82 309 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 ENDOUP21128 410 aaKnown RBP12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 ATP6V1C1P21283 382 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 CNR1P21554 472 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 TBXA2RP21731 343 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 CLK3P49761 638 aaKnown RBP12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 ART3Q13508 389 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 PRAMEF8Q5VWM4 474 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 PRAMEF7Q5VXH5 474 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 NANOGP8Q6NSW7 305 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 SLC30A6Q6NXT4 461 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 TNFAIP8L2Q6P589 184 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 C16orf62Q7Z3J2 963 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 MDGA2Q7Z553 956 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 PRR22Q8IZ63 422 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 POU5F2Q8N7G0 328 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 POGLUT1Q8NBL1 392 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 FBXO30Q8TB52 745 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 SLC39A7Q92504 469 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 EFHD2Q96C19 240 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 NTNG2Q96CW9 530 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 AURKBQ96GD4 344 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 SDF2Q99470 211 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 CPPED1Q9BRF8 314 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 SPATA9Q9BWV2 254 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 ANGPTL4Q9BY76 406 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 ZNF350Q9GZX5 532 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 SAP130Q9H0E3 1048 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 TMEM38AQ9H6F2 299 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 NANOGQ9H9S0 305 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 UBQLN4Q9NRR5 601 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 NDE1Q9NXR1 346 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 P2RX2Q9UBL9 471 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 CNOT11Q9UKZ1 510 aaKnown RBP12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 PCDHGA10Q9Y5H3 936 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 FAM208BQ5VWN6 2430 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 BOD1L1Q8NFC6 3051 aa12.7□□□□□ -0.38
NSMCE1-201ENST00000361439 FXYD1O00168 92 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 TNFRSF21O75509 655 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 SORBS2O94875 1100 aaKnown RBP12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 F10P00742 488 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 CCL3P10147 92 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 CASP3P42574 277 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 DSTNP60981 165 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 HPCAP84074 193 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 RBBP4Q09028 425 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 PLEKHN1Q494U1 663 aaPredicted RBP12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 COX20Q5RI15 118 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 LRRC74BQ6ZQY2 392 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms