RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CLDN24A6NM45 220 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 APOC3P02656 99 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 CFL1P23528 166 aaKnown RBP12.96□□□□□ -0.33
VCP-201ENST00000358901 CHMP24386 653 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 GDI2P50395 445 aaKnown RBP12.96□□□□□ -0.33
VCP-201ENST00000358901 FAM76BQ5HYJ3 339 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 TMEM225Q6GV28 225 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 LCTLQ6UWM7 567 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 SH2D5Q6ZV89 423 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 DGLUCYQ7Z3D6 616 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 ZNF761Q86XN6 746 aaPredicted RBP12.96□□□□□ -0.33
VCP-201ENST00000358901 ALDH16A1Q8IZ83 802 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 DNAJC22Q8N4W6 341 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 RASGEF1AQ8N9B8 481 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 DTD2Q96FN9 168 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 TMEM185BQ9H7F4 350 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 SLC2A4RGQ9NR83 387 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 MGAT4AQ9UM21 535 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 AP1G1O43747 822 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 CFIP05156 583 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 H2BFMP0C1H6 154 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 BMP4P12644 408 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 HOXC13P31276 330 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 ARRB2P32121 409 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 PIGAP37287 484 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 ART1P52961 327 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 VAMP2P63027 116 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 TP53I3Q53FA7 332 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 PYHIN1Q6K0P9 492 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 C7orf34Q96L11 122 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 SLC6A7Q99884 636 aa12.96□□□□□ -0.33
VCP-201ENST00000358901 DDX31Q9H8H2 851 aaKnown RBP12.96□□□□□ -0.33
VCP-201ENST00000358901 FBXO9Q9UK97 447 aaPredicted RBP12.96□□□□□ -0.33
VCP-201ENST00000358901 AK6Q9Y3D8 172 aaKnown RBP12.96□□□□□ -0.33
VCP-201ENST00000358901 A0A1B0GTW7 788 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 CHP2O43745 196 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 C1orf105O95561 183 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 GKN3PP0CG01 181 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 AHRP35869 848 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 HNRNPA1L2Q32P51 320 aaKnown RBP12.96□□□□□ -0.34
VCP-201ENST00000358901 OR2G6Q5TZ20 316 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 PDZD3Q86UT5 571 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 GKN2Q86XP6 184 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 CPXM2Q8N436 756 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 SPRYD4Q8WW59 207 aaPredicted RBP12.96□□□□□ -0.34
VCP-201ENST00000358901 ASB12Q8WXK4 309 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 TMEM234Q8WY98 164 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 RTP3Q9BQQ7 232 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 PKD1L3Q7Z443 1732 aa12.96□□□□□ -0.34
VCP-201ENST00000358901 HYKKA2RU49 373 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 OR5K4A6NMS3 321 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 FBXO45P0C2W1 286 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 C5AR1P21730 350 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 CTXN1P60606 82 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 LEG1Q6P5S2 330 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ZC3H14Q6PJT7 736 aaKnown RBP12.95□□□□□ -0.34
VCP-201ENST00000358901 TBPL2Q6SJ96 375 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ZNF283Q8N7M2 679 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 TMIEQ8NEW7 156 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 OR2T4Q8NH00 348 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ADAMTS16Q8TE57 1224 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 CHPT1Q8WUD6 406 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 PRRC1Q96M27 445 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 GAS2L1Q99501 681 aaPredicted RBP12.95□□□□□ -0.34
VCP-201ENST00000358901 TREX2Q9BQ50 279 aaPredicted RBP12.95□□□□□ -0.34
VCP-201ENST00000358901 COPZ2Q9P299 210 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 NPIPA5A0A0B4J1W7 369 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 C9J4A7 227 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 NPIPA7E9PJI5 369 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 NDUFB2O95178 105 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 NPIPA8P0DM63 369 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ARAFP10398 606 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 NR2C1P13056 603 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 HOXD12P35452 270 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 RAB40BQ12829 278 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 PHF19Q5T6S3 580 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 SLC22A10Q63ZE4 541 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 NOXA1Q86UR1 476 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 HORMAD2Q8N7B1 307 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ZNF740Q8NDX6 193 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 MS4A4EQ96PG1 132 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ATXN7L1Q9ULK2 861 aaPredicted RBP12.95□□□□□ -0.34
VCP-201ENST00000358901 CYP8B1Q9UNU6 501 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 C14orf166Q9Y224 244 aaKnown RBP12.95□□□□□ -0.34
VCP-201ENST00000358901 TUBGCP6Q96RT7 1819 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 A0A1W2PPL8 197 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ZNF195O14628 629 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 CASC3O15234 703 aaKnown RBP12.95□□□□□ -0.34
VCP-201ENST00000358901 CDC40O60508 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
VCP-201ENST00000358901 PSMB5P28074 263 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 PITPNBP48739 271 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ARRB1P49407 418 aaPredicted RBP12.95□□□□□ -0.34
VCP-201ENST00000358901 SGSHP51688 502 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 PLCXD2Q0VAA5 305 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 PUS10Q3MIT2 529 aaKnown RBP12.95□□□□□ -0.34
VCP-201ENST00000358901 SPIN3Q5JUX0 258 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 BAIAP2L2Q6UXY1 529 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 DPPA4Q7L190 304 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 NRARPQ7Z6K4 114 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 RASGRP3Q8IV61 690 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms