RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 OR2AG1Q9H205 316 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 CRTAC1Q9NQ79 661 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 GPRC5BQ9NZH0 403 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 SLC22A31A6NKX4 558 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 B4DXG7 233 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 NPC1O15118 1278 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 B3GALT2O43825 422 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 GABRB1P18505 474 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 RPS12P25398 132 aaKnown RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 SLC6A9P48067 706 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ACTA2P62736 377 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ACTG2P63267 376 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 MRPS6P82932 125 aaKnown RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 C19orf57Q0VDD7 668 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 CARD16Q5EG05 197 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 SHFQ7M4L6 423 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 SKA3Q8IX90 412 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 AKR7LQ8NHP1 331 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 C2CD4CQ8TF44 421 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 CXorf40BQ96DE9 158 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 A0A087WZY1 265 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 FAM72CH0Y354 149 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 FAM72AQ5TYM5 149 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 SLC6A19Q695T7 634 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 FAM72DQ6L9T8 149 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 Q6ZPB1 254 aaPredicted RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 FAM72BQ86X60 149 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 OR6K2Q8NGY2 324 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 CXorf40AQ8TE69 158 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 GIMAP1Q8WWP7 306 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 HMX1Q9NP08 348 aaPredicted RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ACOXLQ9NUZ1 547 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 MUC4Q99102 2169 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 OR1F1O43749 312 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 G0S2P27469 103 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 BTF3L4Q96K17 158 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF300Q96RE9 604 aaPredicted RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 TOLLIPQ9H0E2 274 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 BTNL2Q9UIR0 455 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 SIX4Q9UIU6 781 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 DHDHQ9UQ10 334 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 GPR52Q9Y2T5 361 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 MTCL1Q9Y4B5 1905 aaKnown RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 URADA6NGE7 173 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 H3BSH0 61 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ARSAP15289 507 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 CLDN20P56880 219 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 SPIN3Q5JUX0 258 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 ARNTL2Q8WYA1 636 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 C12orf42Q96LP6 360 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 SUCNR1Q9BXA5 334 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 TUBG2Q9NRH3 451 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 SLC23A1Q9UHI7 598 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 STYXL1Q9Y6J8 313 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 TREHO43280 583 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 SCG5P05408 212 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 CSF3P09919 207 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 HRH2P25021 359 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 FKBP1AP62942 108 aaKnown RBP5.77□□□□□ -1.49
VPS13B-203ENST00000358544 CAP1Q01518 475 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 AVL9Q8NBF6 648 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 MAL2Q969L2 176 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 DEFB129Q9H1M3 183 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 NLGN3Q9NZ94 848 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 PIK3C2BO00750 1634 aa5.77□□□□□ -1.49
VPS13B-203ENST00000358544 RFXAPO00287 272 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PRAMEF11O60813 436 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 DCNP07585 359 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CPT2P23786 658 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ETV5P41161 510 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 IDH3GP51553 393 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 BEX3Q00994 111 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF33AQ06730 810 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ST3GAL3Q11203 375 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 TAF10Q12962 218 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 USP51Q70EK9 711 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ADGRF3Q8IZF5 1079 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 FAM110BQ8TC76 370 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SLAMF9Q96A28 289 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 C5orf34Q96MH7 638 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 GLIS2Q9BZE0 524 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 TMPRSS5Q9H3S3 457 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 NDUFB11Q9NX14 153 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 MARCH4Q9P2E8 410 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 RBM7Q9Y580 266 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 TRBV2A0A0J9YWF9 115 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM72A0PK05 275 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SIGLEC6O43699 453 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CELF2O95319 508 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 HSD17B2P37059 387 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 INCA1Q0VD86 236 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SCAPQ12770 1279 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SAXO2Q658L1 398 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 RASGRP3Q8IV61 690 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 LSMEM2Q8N112 164 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PNLDC1Q8NA58 520 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF563Q8TA94 476 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SLC16A10Q8TF71 515 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 FBRSQ9HAH7 460 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 BCL9LQ86UU0 1499 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms