RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 HRH4Q9H3N8 390 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 NIT2Q9NQR4 276 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 GNG13Q9P2W3 67 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 LRP6O75581 1613 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 A0A1W2PS29 197 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 KCNC1P48547 511 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 C3orf33Q6P1S2 294 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 PLBD1Q6P4A8 553 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SFXN5Q8TD22 340 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SMPDL3AQ92484 453 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 RRNAD1Q96FB5 475 aaKnown RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 RASD1Q9Y272 281 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 DNMT3AQ9Y6K1 912 aaPredicted RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 PRAMEF11O60813 436 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 CSKP41240 450 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 RPS24P62847 133 aaKnown RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 RPS26P62854 115 aaKnown RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 APOOLQ6UXV4 268 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 TRIM46Q7Z4K8 759 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 OR5D16Q8NGK9 328 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 OR5AK2Q8NH90 309 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SYNPRQ8TBG9 265 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SLC16A10Q8TF71 515 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 INPP5KQ9BT40 448 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 NKX6-2Q9C056 277 aaPredicted RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 PIGMQ9H3S5 423 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 CRTAC1Q9NQ79 661 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 EMCNQ9ULC0 261 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 A0A0G2JN53 185 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF780AO75290 641 aaPredicted RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 UGT3A2Q3SY77 523 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 PXDC1Q5TGL8 231 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SLX4IPQ5VYV7 408 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 TMEM150AQ86TG1 271 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 CAMKVQ8NCB2 501 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 OR9A1PQ8NGU1 263 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 CENPOQ9BU64 300 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 GSTO2Q9H4Y5 243 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 TSPAN11A1L157 253 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF169Q14929 603 aaPredicted RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SLC24A5Q71RS6 500 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 LILRA2Q8N149 483 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SLC7A6Q92536 515 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 HAS2Q92819 552 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SEC61A2Q9H9S3 476 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 DZANK1Q9NVP4 752 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 AIPO00170 330 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 OPCMLQ14982 345 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 DCST2Q5T1A1 773 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 LRIF1Q5T3J3 769 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 SYT6Q5T7P8 510 aaPredicted RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 GPR157Q5UAW9 335 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 TIGD3Q6B0B8 471 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 HCAR2Q8TDS4 363 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 FRZBQ92765 325 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 GLYATL1Q969I3 302 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 RPL10LQ96L21 214 aaKnown RBP8.33□□□□□ -1.08
COL6A6-201ENST00000358511 C1orf74Q96LT6 269 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 ACTL8Q9H568 366 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 ERVMER34-1Q9H9K5 563 aa8.33□□□□□ -1.08
COL6A6-201ENST00000358511 AGAP14A8MT82 685 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 MED6O75586 246 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 RAB4AP20338 218 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 GPR143P51810 404 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 SCAPQ12770 1279 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 CES4AQ5XG92 561 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 HBMQ6B0K9 141 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 METTL2BQ6P1Q9 378 aaKnown RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 SPATC1Q76KD6 591 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 FAM122BQ7Z309 247 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 GPR142Q7Z601 462 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 FBXO15Q8NCQ5 510 aaPredicted RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 OR4K5Q8NGD3 323 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 G6PC3Q9BUM1 346 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 RAB3DO95716 219 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 OR4Q2P0C623 313 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 S100A11P31949 105 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 RUNX2Q13950 521 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 SHFQ7M4L6 423 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 TRIB2Q92519 343 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 FUBP1Q96AE4 644 aaKnown RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 KLHL15Q96M94 604 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 SAMD10Q9BYL1 202 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 NMNAT1Q9HAN9 279 aaPredicted RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 TXNL4BQ9NX01 149 aaKnown RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF223Q9UK11 482 aaPredicted RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 PCDHGA6Q9Y5G7 932 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 GPR45Q9Y5Y3 372 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 WDR81Q562E7 1941 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 GAPDHSO14556 408 aaPredicted RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF16P17020 682 aaPredicted RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 NDUFS1P28331 727 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 CTNNB1P35222 781 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 SLC10A2Q12908 348 aaPredicted RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 MS4A13Q5J8X5 152 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 VAPAQ9P0L0 249 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 BCORQ6W2J9 1755 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 ALPK2Q86TB3 2170 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 RAB6AP20340 208 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms