RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ATAD3BQ5T9A4 648 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 C16orf62Q7Z3J2 963 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 ZNF227Q86WZ6 799 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 DEFB107AQ8IZN7 70 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 PGAM4Q8N0Y7 254 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 ANKFN1Q8N957 763 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 CHDHQ8NE62 594 aaPredicted RBP13.68□□□□□ -0.22
CCNE1-202ENST00000357943 OR10G3Q8NGC4 313 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 DIO2Q92813 273 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 HAS2Q92819 552 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 SPACA9Q96E40 222 aaPredicted RBP13.68□□□□□ -0.22
CCNE1-202ENST00000357943 SIGLEC12Q96PQ1 595 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 SDF2Q99470 211 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 ECSITQ9BQ95 431 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 UTP23Q9BRU9 249 aaKnown RBP13.68□□□□□ -0.22
CCNE1-202ENST00000357943 LRFN1Q9P244 771 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 GMPR2Q9P2T1 348 aaKnown RBP13.68□□□□□ -0.22
CCNE1-202ENST00000357943 USP22Q9UPT9 525 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 L3MBTL1Q9Y468 752 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 C15orf38-AP3S2A0A0A6YYH1 394 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 OR5H15A6NDH6 313 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 FCMRO60667 390 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 ZIC2O95409 532 aaPredicted RBP13.68□□□□□ -0.22
CCNE1-202ENST00000357943 IL33O95760 270 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 BCHEP06276 602 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 TFPTP0C1Z6 253 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 NAGAP17050 411 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 IL12BP29460 328 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 KRT20P35900 424 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 TMED10P49755 219 aaKnown RBP13.68□□□□□ -0.22
CCNE1-202ENST00000357943 GZMMP51124 257 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 PSPHP78330 225 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 ARG2P78540 354 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 KCNAB2Q13303 367 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 CYP51A1Q16850 503 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 GPAT3Q53EU6 434 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 GCNT6Q5T4J0 391 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 SPINK14Q6IE38 97 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 C16orf89Q6UX73 402 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 MDGA2Q7Z553 956 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 ARPINQ7Z6K5 226 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 SERPINA11Q86U17 422 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 PTOV1Q86YD1 416 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 CYP4Z2PQ8N1L4 340 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 FAM13CQ8NE31 585 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 CATSPER1Q8NEC5 780 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 SLC38A5Q8WUX1 472 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 SLC7A6OSQ96CW6 309 aaPredicted RBP13.68□□□□□ -0.22
CCNE1-202ENST00000357943 ZNF583Q96ND8 569 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 RNF32Q9H0A6 362 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 RUBCNLQ9H714 662 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 TRIM45Q9H8W5 580 aaPredicted RBP13.68□□□□□ -0.22
CCNE1-202ENST00000357943 SPAG4Q9NPE6 437 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 TMEM181Q9P2C4 612 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 ABCD2Q9UBJ2 740 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 P2RX2Q9UBL9 471 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 PACSIN3Q9UKS6 424 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 TP53TG5Q9Y2B4 290 aa13.68□□□□□ -0.22
CCNE1-202ENST00000357943 CPAMD8Q8IZJ3 1885 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 OR6C70A6NIJ9 312 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 ATP5HO75947 161 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 NEURL1O76050 574 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 H6PDO95479 791 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 AK1P00568 194 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 CHRM4P08173 479 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 NR2F1P10589 423 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 PSMD4P55036 377 aaKnown RBP13.67□□□□□ -0.22
CCNE1-202ENST00000357943 RHDQ02161 417 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 OR1C1Q15619 314 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.67□□□□□ -0.22
CCNE1-202ENST00000357943 NET1Q7Z628 596 aaPredicted RBP13.67□□□□□ -0.22
CCNE1-202ENST00000357943 CALHM3Q86XJ0 350 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 HGDQ93099 445 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 TMEM19Q96HH6 336 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 COL21A1Q96P44 957 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 ZNF350Q9GZX5 532 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 C1orf21Q9H246 121 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 TMEM38AQ9H6F2 299 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 THUMPD1Q9NXG2 353 aaKnown RBP13.67□□□□□ -0.22
CCNE1-202ENST00000357943 NDE1Q9NXR1 346 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 ADA2Q9NZK5 511 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 FLRT3Q9NZU0 649 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 MRTO4Q9UKD2 239 aaKnown RBP13.67□□□□□ -0.22
CCNE1-202ENST00000357943 MKLN1Q9UL63 735 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 LIPT1Q9Y234 373 aa13.67□□□□□ -0.22
CCNE1-202ENST00000357943 PIEZO2Q9H5I5 2752 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 CNTRLQ7Z7A1 2325 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 NPIPA5A0A0B4J1W7 369 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 NPIPA7E9PJI5 369 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 SLC28A2O43868 658 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 ABCB7O75027 752 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 ICOSLGO75144 302 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 STX11O75558 287 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 NPIPA8P0DM63 369 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 ARAFP10398 606 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 CYP4B1P13584 511 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 CASRP41180 1078 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 PNLIPRP2P54317 469 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 NCALDP61601 193 aa13.66□□□□□ -0.22
CCNE1-202ENST00000357943 CHRNEQ04844 493 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms