RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 ABCD2Q9UBJ2 740 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 C19orf25Q9UFG5 118 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 SNX13Q9Y5W8 968 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 FAM208BQ5VWN6 2430 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 SPTAN1Q13813 2472 aaKnown RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 CPAMD8Q8IZJ3 1885 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 GSC2O15499 205 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 TSPAN2O60636 221 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 CEACAM4O75871 244 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 H6PDO95479 791 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 NTN1O95631 604 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 CCL3P10147 92 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 TNFRSF1BP20333 461 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 PIGAP37287 484 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 PTGDSP41222 190 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 GSK3BP49841 420 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 GPR85P60893 370 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 MRPS22P82650 360 aaKnown RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 CD226Q15762 336 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 DUSP7Q16829 419 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 CRTC2Q53ET0 693 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 PIGGQ5H8A4 983 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 RNFT1Q5M7Z0 435 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 FNDC7Q5VTL7 733 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 HEPHL1Q6MZM0 1159 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 CBLN3Q6UW01 205 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 FRRS1Q6ZNA5 592 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 TMEM102Q8N9M5 508 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 CLEC1AQ8NC01 280 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 OR52N2Q8NGI0 321 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 MIPOL1Q8TD10 442 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 THAP4Q8WY91 577 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 RELTQ969Z4 430 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 LCORQ96JN0 433 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 MS4A4EQ96PG1 132 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 LMF2Q9BU23 707 aaKnown RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 ACTRT3Q9BYD9 372 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 LHPPQ9H008 270 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 PRORYQ9H606 182 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 NEUROD4Q9HD90 331 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 TMEM45AQ9NWC5 275 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 POLHQ9Y253 713 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 NPFFR2Q9Y5X5 522 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 CHCHD2Q9Y6H1 151 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 EXPH5Q8NEV8 1989 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 H0YHG0 523 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 GMFGO60234 142 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 TPST2O60704 377 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 PRAMEF2O60811 474 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 ICOSLGO75144 302 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 ZFAND5O76080 213 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 OPN1SWP03999 348 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 BCHEP06276 602 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 CD63P08962 238 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 DRD5P21918 477 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 CALB2P22676 271 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 SOX8P57073 446 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 HOXC5Q00444 222 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 LIPEQ05469 1076 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 ZNF155Q12901 538 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 AIMP2Q13155 320 aaKnown RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 PRAMEF20Q5VT98 475 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 TYW3Q6IPR3 259 aaKnown RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 CDC73Q6P1J9 531 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 PGM2L1Q6PCE3 622 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 MSANTD1Q6ZTZ1 278 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 RBM45Q8IUH3 476 aaKnown RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 APLFQ8IW19 511 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 KBTBD2Q8IY47 623 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 ZZZ3Q8IYH5 903 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 SAMD14Q8IZD0 417 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 CLIP4Q8N3C7 705 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 GATSQ8NAP1 163 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 OR7G1Q8NGA0 311 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 OR4D11Q8NGI4 311 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 NFKBIDQ8NI38 313 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 GRHL3Q8TE85 626 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 TTC9Q92623 222 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 OMA1Q96E52 524 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 TMEM19Q96HH6 336 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 TREX2Q9BQ50 279 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 PIGUQ9H490 435 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 RMND5AQ9H871 391 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 COPS7AQ9UBW8 275 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 GMEB1Q9Y692 573 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 PCNX1Q96RV3 2341 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 LRRK2Q5S007 2527 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 TMEM247A6NEH6 219 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 EIF4E1BA6NMX2 242 aaKnown RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 FRS3O43559 492 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 UGT2B17O75795 530 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 RFPL3SP0C7P2 107 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 BMP2P12643 396 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 PRDX6P30041 224 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 POLE2P56282 527 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 PRR5P85299 388 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 OC90Q02509 493 aaPredicted RBP3.7□□□□□ -1.82
LIG4-201ENST00000356922 ART3Q13508 389 aa3.7□□□□□ -1.82
LIG4-201ENST00000356922 TUBA3CQ13748 450 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms