RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 OR4K1Q8NGD4 311 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 UPRTQ96BW1 309 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 ZC3H10Q96K80 434 aaKnown RBP9.49□□□□□ -0.89
SYNE1-203ENST00000354674 BARHL1Q9BZE3 327 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 CHIAQ9BZP6 476 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 DUSP21Q9H596 190 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 PELI2Q9HAT8 420 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 POT1Q9NUX5 634 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 OR6C2Q9NZP2 312 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 TMEFF2Q9UIK5 374 aaPredicted RBP9.49□□□□□ -0.89
SYNE1-203ENST00000354674 TINAGQ9UJW2 476 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 PDYNP01213 254 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 ANXA6P08133 673 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 CTSEP14091 401 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 SLC2A4P14672 509 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 ELOCQ15369 112 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 CPSF6Q16630 551 aaKnown RBP eCLIP9.49□□□□□ -0.89
SYNE1-203ENST00000354674 PLK5Q496M5 336 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 PAN3Q58A45 887 aaKnown RBP9.49□□□□□ -0.89
SYNE1-203ENST00000354674 FRG2Q64ET8 278 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 GPAT4Q86UL3 456 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 UTP15Q8TED0 518 aaKnown RBP9.49□□□□□ -0.89
SYNE1-203ENST00000354674 WNT2BQ93097 391 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 REPS1Q96D71 796 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 FBXO17Q96EF6 278 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 FRG2BQ96QU4 278 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 EFCAB11Q9BUY7 163 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 ASPNQ9BXN1 380 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 SDHAF2Q9NX18 166 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 DCAF16Q9NXF7 216 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 COMMD3Q9UBI1 195 aa9.49□□□□□ -0.89
SYNE1-203ENST00000354674 A0A1W2PPL8 197 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 OR2W5A6NFC9 320 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 HRO43593 1189 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 GPR37L1O60883 481 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 UGT2B17O75795 530 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 PEBP1P30086 187 aaKnown RBP9.48□□□□□ -0.89
SYNE1-203ENST00000354674 CSNK1EP49674 416 aaKnown RBP9.48□□□□□ -0.89
SYNE1-203ENST00000354674 DOC2BQ14184 412 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 KRT33BQ14525 404 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 ZNF169Q14929 603 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-203ENST00000354674 PRRT3Q5FWE3 981 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 C6orf136Q5SQH8 315 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 LYSMD4Q5XG99 296 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 TAF8Q7Z7C8 310 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 C17orf82Q86X59 251 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-203ENST00000354674 PROSER1Q86XN7 944 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 C19orf18Q8NEA5 215 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 OR2A1Q8NGT9 310 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 CXorf40BQ96DE9 158 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 WDR77Q9BQA1 342 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-203ENST00000354674 ACPTQ9BZG2 426 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 BRINP2Q9C0B6 783 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 NIT2Q9NQR4 276 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 PILRBQ9UKJ0 227 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 V9GYH0 126 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 ISM1B1AKI9 464 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 ANKRD28O15084 1053 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 RGS14O43566 566 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 AKAP8O43823 692 aaKnown RBP9.48□□□□□ -0.89
SYNE1-203ENST00000354674 HSD3B1P14060 373 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 HSD3B2P26439 372 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 ACVR2AP27037 513 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 EMX2Q04743 252 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 ETFDHQ16134 617 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 SWI5Q1ZZU3 235 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 CCDC71Q8IV32 467 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-203ENST00000354674 ADGRF3Q8IZF5 1079 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 MS4A15Q8N5U1 240 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 JAM3Q9BX67 310 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 XKR8Q9H6D3 395 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 BRF2Q9HAW0 419 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 CUEDC1Q9NWM3 386 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-203ENST00000354674 ASIC5Q9NY37 505 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 ACTR10Q9NZ32 417 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 PDP1Q9P0J1 537 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-203ENST00000354674 HCN3Q9P1Z3 774 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 TAC3Q9UHF0 121 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 RAB23Q9ULC3 237 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 PPT2Q9UMR5 302 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 SLC6A14Q9UN76 642 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 PCDHB11Q9Y5F2 797 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 GPR45Q9Y5Y3 372 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 CACNA1IQ9P0X4 2223 aa9.48□□□□□ -0.89
SYNE1-203ENST00000354674 MN1Q10571 1320 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-203ENST00000354674 ABCA7Q8IZY2 2146 aa9.47□□□□□ -0.89
SYNE1-203ENST00000354674 A0A0A6YYJ9 748 aa9.47□□□□□ -0.89
SYNE1-203ENST00000354674 YKT6O15498 198 aa9.47□□□□□ -0.89
SYNE1-203ENST00000354674 RAF1P04049 648 aa9.47□□□□□ -0.89
SYNE1-203ENST00000354674 ARSBP15848 533 aa9.47□□□□□ -0.89
SYNE1-203ENST00000354674 CXCL3P19876 107 aa9.47□□□□□ -0.89
SYNE1-203ENST00000354674 RAB3AP20336 220 aa9.47□□□□□ -0.89
SYNE1-203ENST00000354674 F8A1P23610 371 aa9.47□□□□□ -0.89
SYNE1-203ENST00000354674 CNR2P34972 360 aa9.47□□□□□ -0.89
SYNE1-203ENST00000354674 KCNJ3P48549 501 aa9.47□□□□□ -0.89
SYNE1-203ENST00000354674 MEOX2P50222 304 aa9.47□□□□□ -0.89
SYNE1-203ENST00000354674 RAB8AP61006 207 aa9.47□□□□□ -0.89
SYNE1-203ENST00000354674 HNRNPKP61978 463 aaKnown RBP eCLIP9.47□□□□□ -0.89
SYNE1-203ENST00000354674 PRDX1Q06830 199 aaKnown RBP9.47□□□□□ -0.89
SYNE1-203ENST00000354674 SRSF5Q13243 272 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms