RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 C2orf27AQ580R0 203 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 C3orf38Q5JPI3 329 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 DDI2Q5TDH0 399 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 RTL10Q7L3V2 364 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 GALNT12Q8IXK2 581 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 ZNF513Q8N8E2 541 aaPredicted RBP18.32■□□□□ 0.52
COL13A1-201ENST00000354547 PIGXQ8TBF5 258 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 CDS1Q92903 461 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 SLC35A4Q96G79 324 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 BTBD1Q9H0C5 482 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 PRKAG2Q9UGJ0 569 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 CA5BQ9Y2D0 317 aa18.32■□□□□ 0.52
COL13A1-201ENST00000354547 IQCMA0A1B0GVH7 501 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 ZC3H12DA2A288 527 aaKnown RBP18.31■□□□□ 0.52
COL13A1-201ENST00000354547 MEIOCA2RUB1 952 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 DNAJB6O75190 326 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 EML2O95834 649 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 APEX1P27695 318 aaKnown RBP18.31■□□□□ 0.52
COL13A1-201ENST00000354547 EFNB1P98172 346 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 RAB40BQ12829 278 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TBRG1Q3YBR2 411 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 GLCCI1Q86VQ1 547 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 DTX3Q8N9I9 347 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 KXD1Q9BQD3 176 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TTYH2Q9BSA4 534 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 PLA2G2FQ9BZM2 168 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 PITHD1Q9GZP4 211 aaPredicted RBP18.31■□□□□ 0.52
COL13A1-201ENST00000354547 ZNF860A6NHJ4 632 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 CD8B2A6NJW9 211 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 CASC3O15234 703 aaKnown RBP18.31■□□□□ 0.52
COL13A1-201ENST00000354547 PROM1O43490 865 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 CD8BP10966 210 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 SIM1P81133 766 aaPredicted RBP18.31■□□□□ 0.52
COL13A1-201ENST00000354547 UBE3AQ05086 875 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 ST3GAL3Q11203 375 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TSPAN31Q12999 210 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 GPR68Q15743 365 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 CCDC92Q53HC0 331 aaPredicted RBP18.31■□□□□ 0.52
COL13A1-201ENST00000354547 SLC35F1Q5T1Q4 408 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 MRM1Q6IN84 353 aaKnown RBP18.31■□□□□ 0.52
COL13A1-201ENST00000354547 CAPN10Q9HC96 672 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 CES1P1Q9UKY3 287 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TBC1D3DA0A087WVF3 549 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TBC1D3IA0A087WXS9 549 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TBC1D3EA0A087X179 549 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TBC1D3KA0A087X1G2 549 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 CENPVL1A0A0U1RR11 272 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TBC1D3FA6NER0 549 aaPredicted RBP18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TBC1D3LB9A6J9 549 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 DVL2O14641 736 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 GUCY1B2O75343 617 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TBC1D3HP0C7X1 549 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 ZNF888P0CJ79 500 aaPredicted RBP18.31■□□□□ 0.52
COL13A1-201ENST00000354547 IFNGR2P38484 337 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 RPE65Q16518 533 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TBC1D3GQ6DHY5 549 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TBC1D3CQ6IPX1 549 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 KIAA1211LQ6NV74 962 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 TBC1D3Q8IZP1 549 aaPredicted RBP18.31■□□□□ 0.52
COL13A1-201ENST00000354547 SP7Q8TDD2 431 aaPredicted RBP18.31■□□□□ 0.52
COL13A1-201ENST00000354547 DIO2Q92813 273 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 SMAD5Q99717 465 aaKnown RBP18.31■□□□□ 0.52
COL13A1-201ENST00000354547 MED20Q9H944 212 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 PCDHGB2Q9Y5G2 931 aa18.31■□□□□ 0.52
COL13A1-201ENST00000354547 SNTNA6NMZ2 147 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 SOCS6O14544 535 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 COQ9O75208 318 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 SLC1A3P43003 542 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 TMEM64Q6YI46 380 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 LINC00471Q8N535 108 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 OR7G2Q8NG99 324 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 LCN9Q8WX39 176 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 FGF11Q92914 225 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 MKRN2Q9H000 416 aaKnown RBP18.3■□□□□ 0.52
COL13A1-201ENST00000354547 KLHL28Q9NXS3 571 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 GSTK1Q9Y2Q3 226 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 NPIPA5A0A0B4J1W7 369 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 CCDC182A6NF36 153 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 NPIPA7E9PJI5 369 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 HPGDSO60760 199 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 THY1P04216 161 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 NPIPA8P0DM63 369 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 IFNA8P32881 189 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 OMPP47874 163 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 GLYR1Q49A26 553 aaPredicted RBP18.3■□□□□ 0.52
COL13A1-201ENST00000354547 MINDY4Q4G0A6 757 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 DEFB134Q4QY38 66 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 FAM109BQ6ICB4 259 aaPredicted RBP18.3■□□□□ 0.52
COL13A1-201ENST00000354547 MARCH9Q86YJ5 346 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 SAMD8Q96LT4 415 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 SECISBP2Q96T21 854 aaKnown RBP18.3■□□□□ 0.52
COL13A1-201ENST00000354547 FGF22Q9HCT0 170 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 NUFIP1Q9UHK0 495 aaKnown RBP18.3■□□□□ 0.52
COL13A1-201ENST00000354547 DPP7Q9UHL4 492 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 SLC7A7Q9UM01 511 aa18.3■□□□□ 0.52
COL13A1-201ENST00000354547 CACNB4O00305 520 aaPredicted RBP18.29■□□□□ 0.52
COL13A1-201ENST00000354547 GKN3PP0CG01 181 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 CMPK1P30085 196 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 AHRP35869 848 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 RFX3P48380 749 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms