RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 HACD2Q6Y1H2 254 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 Q6ZRP5 223 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RFPL4BQ6ZWI9 263 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 FCRLAQ7L513 359 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 TAS2R42Q7RTR8 314 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 FAM131BQ86XD5 332 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CATSPERDQ86XM0 798 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CCDC71Q8IV32 467 aaPredicted RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ALLCQ8N6M5 410 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF491Q8N8L2 437 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 MLKLQ8NB16 471 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 TMEM178AQ8NBL3 297 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 DDHD1Q8NEL9 900 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 OR1L6Q8NGR2 347 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RPLP0P6Q8NHW5 317 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 LMO3Q8TAP4 145 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 SECTM1Q8WVN6 248 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ST8SIA1Q92185 356 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 LHX4Q969G2 390 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 MOCOSQ96EN8 888 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF479Q96JC4 524 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 AMDHD1Q96NU7 426 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RIT2Q99578 217 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RBM24Q9BX46 236 aaKnown RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CRNKL1Q9BZJ0 848 aaKnown RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 STRADBQ9C0K7 418 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 FAM124BQ9H5Z6 455 aaPredicted RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CLMPQ9H6B4 373 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 MAN2C1Q9NTJ4 1040 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RNF14Q9UBS8 474 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 IL36AQ9UHA7 158 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 FZR1Q9UM11 496 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 GSTK1Q9Y2Q3 226 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 SSH2Q76I76 1423 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 DIP2CQ9Y2E4 1556 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF521Q96K83 1311 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 STK36Q9NRP7 1315 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 HELZ2Q9BYK8 2649 aaKnown RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 KDM3BQ7LBC6 1761 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 LINC00854A0A1B0GVQ3 168 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 LRP5LA4QPB2 252 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 G3V4G9 280 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 TIMM8AO60220 97 aaPredicted RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 B3GAT3O94766 335 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ANGPTL1O95841 491 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 F10P00742 488 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 IGF1P05019 195 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RPLP0P05388 317 aaKnown RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 SP1P08047 785 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 NCF2P19878 526 aaPredicted RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 DPP4P27487 766 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 PPP2R1BP30154 601 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 OTX2P32243 289 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 OPRL1P41146 370 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 FHITP49789 147 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 IRF8Q02556 426 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 DPTQ07507 201 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 MEF2DQ14814 521 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 SLC17A1Q14916 467 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 EZH2Q15910 746 aaKnown RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 OR2A2Q6IF42 318 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 ASCL5Q7RTU5 278 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 C16orf82Q7Z2V1 217 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 C16orf62Q7Z3J2 963 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 KCNMB4Q86W47 210 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 PRIMA1Q86XR5 153 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RNF130Q86XS8 419 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 OTUD6BQ8N6M0 293 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 OR1L4Q8NGR5 311 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RAET1EQ8TD07 263 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CCM2Q9BSQ5 444 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 FAM192AQ9GZU8 254 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 SLC25A51Q9H1U9 297 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 CPVLQ9H3G5 476 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 RPAP3Q9H6T3 665 aaPredicted RBP1.41□□□□□ -2.18
BRCA1-202ENST00000354071 FN3KRPQ9HA64 309 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 GNG12Q9UBI6 72 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 COX11Q9Y6N1 276 aa1.41□□□□□ -2.18
BRCA1-202ENST00000354071 IGHV4-61A0A0C4DH41 118 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 A0A1W2PN81 502 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 TTC26A0AVF1 554 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 EPHB6O15197 1021 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 NBR2O15453 112 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 FCMRO60667 390 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 JAK2O60674 1132 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 IGHV4-59P01825 116 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 FHP07954 510 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 TMEM191BP0C7N4 346 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 OR8G3PP0DMU2 310 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 IGHV4-38-2P0DP08 117 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 SLC2A2P11168 524 aaPredicted RBP1.4□□□□□ -2.18
BRCA1-202ENST00000354071 ETS2P15036 469 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 CYP2B6P20813 491 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 CHRNA7P36544 502 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 PEX19P40855 299 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 MAGEA8P43361 318 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 RPS5P46782 204 aaKnown RBP1.4□□□□□ -2.18
BRCA1-202ENST00000354071 OR3A3P47888 321 aa1.4□□□□□ -2.18
BRCA1-202ENST00000354071 NOVA1P51513 510 aaKnown RBP1.4□□□□□ -2.18
BRCA1-202ENST00000354071 PLA2G16P53816 162 aa1.4□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms