RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SDC3O75056 442 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 WNT1P04628 370 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF806P0C7X5 589 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 SNRPBP14678 240 aaKnown RBP7.18□□□□□ -1.26
BRCA1-201ENST00000352993 ATP5C1P36542 298 aaKnown RBP7.18□□□□□ -1.26
BRCA1-201ENST00000352993 ACVR1BP36896 505 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 PFN3P60673 137 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 ZP1P60852 638 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 ARF5P84085 180 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 MC2RQ01718 297 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 MPEG1Q2M385 716 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF792Q3KQV3 632 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 C6orf132Q5T0Z8 1188 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 RGS7BPQ6MZT1 257 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-201ENST00000352993 SFXN4Q6P4A7 337 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 LRRN1Q6UXK5 716 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 RFLNAQ6ZTI6 216 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 BTN2A1Q7KYR7 527 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 CXXC5Q7LFL8 322 aaKnown RBP7.18□□□□□ -1.26
BRCA1-201ENST00000352993 DGLUCYQ7Z3D6 616 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 COMMD6Q7Z4G1 85 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 SYT9Q86SS6 491 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 ZDHHC1Q8WTX9 485 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 BCL7CQ8WUZ0 217 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-201ENST00000352993 GCDHQ92947 438 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-201ENST00000352993 RFKQ969G6 155 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 GIMAP5Q96F15 307 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 SLC38A3Q99624 504 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 TTTY10Q9BZA0 68 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 OR51I1Q9H343 314 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 A0A0G2JPF8 293 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 HNRNPCL3B7ZW38 293 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 F2P00734 622 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 ADRB1P08588 477 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 HNRNPCL4P0DMR1 293 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 CBSLP0DN79 551 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 CD52P31358 61 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 CBSP35520 551 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 STARP49675 285 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 PITPNAQ00169 270 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 CAMK1Q14012 370 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 SWI5Q1ZZU3 235 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 MINDY4Q4G0A6 757 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 HIST2H2AA3Q6FI13 130 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 MED27Q6P2C8 311 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 AGTRAPQ6RW13 159 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 SMARCD3Q6STE5 483 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 OVCH2Q7RTZ1 564 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 PAQR7Q86WK9 346 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 BVESQ8NE79 360 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 GPR32P1Q8NGA4 272 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 ASB11Q8WXH4 323 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 WFDC6Q9BQY6 131 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 ACTR6Q9GZN1 396 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 AP5M1Q9H0R1 490 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 ISG20L2Q9H9L3 353 aaKnown RBP7.18□□□□□ -1.26
BRCA1-201ENST00000352993 KCNK12Q9HB15 430 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 STARD7Q9NQZ5 370 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 ZDHHC3Q9NYG2 299 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 C5AR2Q9P296 337 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 MRTO4Q9UKD2 239 aaKnown RBP7.18□□□□□ -1.26
BRCA1-201ENST00000352993 RCE1Q9Y256 329 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 CHST2Q9Y4C5 530 aa7.18□□□□□ -1.26
BRCA1-201ENST00000352993 TRAV20A0A0B4J274 112 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 A0A1B0GW55 424 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 ARRDC5A6NEK1 342 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 FAM170BA6NMN3 283 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 RNF13O43567 381 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF623O75123 536 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 F11P03951 625 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 IL3P08700 152 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 ANKRD34CP0C6C1 535 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 DUX4L2P0CJ85 424 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 DUX4L3P0CJ86 424 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 DUX4L4P0CJ87 422 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 DUX4L5P0CJ88 424 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 DUX4L6P0CJ89 424 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 DUX4L7P0CJ90 424 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 ATP5A1P25705 553 aaKnown RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 CORO1AP31146 461 aaKnown RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 SLC6A12P48065 614 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 TAS2R41P59536 307 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 MRPS6P82932 125 aaKnown RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 SLC25A35Q3KQZ1 300 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 PDSS1Q5T2R2 415 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 HECTD3Q5T447 861 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 HAGHLQ6PII5 290 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 SCARB1Q8WTV0 552 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 CNOT9Q92600 299 aaKnown RBP7.17□□□□□ -1.26
BRCA1-201ENST00000352993 SUSD3Q96L08 255 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 HHIPQ96QV1 700 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 YIPF4Q9BSR8 244 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 IFT27Q9BW83 186 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 AUNIPQ9H7T9 357 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 EVA1AQ9H8M9 152 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 TMEM138Q9NPI0 162 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 DUX4Q9UBX2 424 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 ZSWIM8A7E2V4 1837 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 MYO16Q9Y6X6 1858 aa7.17□□□□□ -1.26
BRCA1-201ENST00000352993 ALPK3Q96L96 1907 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms